ID V2JDK6_9BURK Unreviewed; 955 AA.
AC V2JDK6;
DT 22-JAN-2014, integrated into UniProtKB/TrEMBL.
DT 22-JAN-2014, sequence version 1.
DT 24-JAN-2024, entry version 24.
DE SubName: Full=Type VI secretion protein {ECO:0000313|EMBL:ESJ23474.1};
GN ORFNames=B551_0207040 {ECO:0000313|EMBL:ESJ23474.1};
OS Cupriavidus sp. HPC(L).
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Burkholderiaceae; Cupriavidus.
OX NCBI_TaxID=1217418 {ECO:0000313|EMBL:ESJ23474.1, ECO:0000313|Proteomes:UP000053474};
RN [1] {ECO:0000313|EMBL:ESJ23474.1, ECO:0000313|Proteomes:UP000053474}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=HPC(L) {ECO:0000313|Proteomes:UP000053474};
RA Purohit H.J., Agarwal L.;
RT "Cupriavidus a Desert isolate.";
RL Submitted (AUG-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ESJ23474.1}.
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DR EMBL; AMPR02000088; ESJ23474.1; -; Genomic_DNA.
DR RefSeq; WP_006575570.1; NZ_AMPR02000088.1.
DR AlphaFoldDB; V2JDK6; -.
DR OrthoDB; 1907165at2; -.
DR Proteomes; UP000053474; Unassembled WGS sequence.
DR Gene3D; 2.30.110.50; -; 1.
DR Gene3D; 4.10.220.110; -; 1.
DR Gene3D; 3.55.50.10; Baseplate protein-like domains; 1.
DR Gene3D; 2.40.50.230; Gp5 N-terminal domain; 1.
DR InterPro; IPR006531; Gp5/Vgr_OB.
DR InterPro; IPR028244; T6SS_Rhs_Vgr_dom.
DR InterPro; IPR037026; Vgr_OB-fold_dom_sf.
DR InterPro; IPR018769; VgrG2_DUF2345.
DR PANTHER; PTHR32305; -; 1.
DR PANTHER; PTHR32305:SF15; PROTEIN RHSA-RELATED; 1.
DR Pfam; PF10106; DUF2345; 1.
DR Pfam; PF04717; Phage_base_V; 1.
DR Pfam; PF05954; Phage_GPD; 1.
DR Pfam; PF13296; T6SS_Vgr; 1.
DR SUPFAM; SSF69255; gp5 N-terminal domain-like; 1.
DR SUPFAM; SSF69279; Phage tail proteins; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000053474}.
FT DOMAIN 471..539
FT /note="Gp5/Type VI secretion system Vgr protein OB-fold"
FT /evidence="ECO:0000259|Pfam:PF04717"
FT DOMAIN 608..716
FT /note="Putative type VI secretion system Rhs element
FT associated Vgr"
FT /evidence="ECO:0000259|Pfam:PF13296"
FT DOMAIN 765..921
FT /note="DUF2345"
FT /evidence="ECO:0000259|Pfam:PF10106"
SQ SEQUENCE 955 AA; 101630 MW; 57DBD53C6034E051 CRC64;
MDHTTLIQTL FSPARRLFQL EGEGAVGELA VEAWLGREAL SELSEWRIVA VSANARLPLK
SLLGAKVTLW TTLADGERIR RSGLVRKAEK LGADGSLARY RLTVVPWLWL ATQQRHSQVF
QNRTLADIAE QILSPYAPHA VWRYTAGAQQ RIDTLGPREH VSQYRETDYA FLSRLLAEAG
LGFAFVDDEQ APSGHAMTIF ADSPQLPEGQ VSSVRYHRAH SQEEADAVQQ LACHSRVTVP
GVAVVAWDGN GKRTLRGHAP AKLGGGAQCP EPYLSVSQSV VGDAAGAQRL AEQLMESIEA
RAQLFAGQGT VRTFVSGTRV AVSDCPHLPK QEDAEAAYPL LLDIVEHCGL NNLAAETRAA
LGQRLGPLEA ALCFDTPPSA PENGPMTMGF LALGDAVERN VPTASLHQAA EQYGYANLFR
ACDARRPWRP RVVDGNGARL FATPTAIGVQ TATVVGPQGE TQPSGDAEHH VSPRGEIRVR
FPWQKGERED DRSTRWVRVA QRQAGAGMGW QWLPRIGQEV LVKFADDDID QPIVIGALYN
GQGEGGIAPT PGGKQAAAAD ASVYQQGSDT APSAQANVAG GHAPAWHGMS ADQEGHRNAA
ALSGFKSREH GGDGTNQLVF DDSDNQLRTQ LATTVQHSQL NLGHLIHQQD NYRGSFRGEG
FELRTDGYGA IRGKAGVLIS TYRDAQSQRP VPTGDNAAGI ALIRQAKSLT QTLGEGAVKH
QTAALLTAKD DEAQLAKLET AASGMVDGKD LDTAMQDAAS GNQQTQGKVP HPSEAIVQLA
GRAGLAMVAG QELQMVNGKS LGMVSGQDTN LAIGKQARLH SGQAIGIAAA LEKAGEGDTG
LKLIAGSEDI DVQAQHDVMK LQAKDELKVV SANMQVDFAA AKRIRVATAG GASITIEGGN
ITVECPGAIT YKSAQRKFEG PVNGTYPLPA FPQSVCVECM KHAMEGGHAL ALKNG
//