ID V2RKN2_9BACT Unreviewed; 260 AA.
AC V2RKN2;
DT 22-JAN-2014, integrated into UniProtKB/TrEMBL.
DT 22-JAN-2014, sequence version 1.
DT 27-MAR-2024, entry version 40.
DE SubName: Full=Transcriptional regulator KdgR {ECO:0000313|EMBL:USF24382.1};
GN Name=kdgR_1 {ECO:0000313|EMBL:USF24382.1};
GN ORFNames=N508_001468 {ECO:0000313|EMBL:USF24382.1}, N508_00918
GN {ECO:0000313|EMBL:ESJ98263.1};
OS Mucispirillum schaedleri ASF457.
OC Bacteria; Deferribacterota; Deferribacteres; Deferribacterales;
OC Mucispirillaceae; Mucispirillum.
OX NCBI_TaxID=1379858 {ECO:0000313|EMBL:ESJ98263.1};
RN [1] {ECO:0000313|EMBL:ESJ98263.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ASF457 {ECO:0000313|EMBL:ESJ98263.1};
RX PubMed=24723722;
RA Wannemuehler M.J., Overstreet A.M., Ward D.V., Phillips G.J.;
RT "Draft genome sequences of the altered schaedler flora, a defined bacterial
RT community from gnotobiotic mice.";
RL Genome Announc. 2:e00287-e00214(2014).
RN [2] {ECO:0000313|EMBL:USF24382.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=ASF457 {ECO:0000313|EMBL:USF24382.1};
RA Proctor A.L., Phillips G.J., Wannemuehler M.J.;
RL Submitted (MAY-2022) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:USF24382.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=ASF457 {ECO:0000313|EMBL:USF24382.1};
RA Proctor A., Parvinroo S., Richie T., Jia X., Lee S.T.M., Karp P.D.,
RA Paley S., Kostic A.D., Pierre J.F., Wannemuehler M.J., Phillips G.J.;
RT "Resources to Facilitate Use of the Altered Schaedler Flora (ASF) Mouse
RT Model to Study Microbiome Function.";
RL Submitted (JUN-2022) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; AYGZ01000014; ESJ98263.1; -; Genomic_DNA.
DR EMBL; CP097562; USF24382.1; -; Genomic_DNA.
DR RefSeq; WP_023275765.1; NZ_FTRD01000031.1.
DR AlphaFoldDB; V2RKN2; -.
DR STRING; 1379858.N508_00918; -.
DR GeneID; 78588203; -.
DR PATRIC; fig|1379858.3.peg.915; -.
DR eggNOG; COG1414; Bacteria.
DR HOGENOM; CLU_062618_7_1_0; -.
DR OrthoDB; 13103at2; -.
DR Proteomes; UP000017429; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR014757; Tscrpt_reg_IclR_C.
DR InterPro; IPR005471; Tscrpt_reg_IclR_N.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30136; HELIX-TURN-HELIX TRANSCRIPTIONAL REGULATOR, ICLR FAMILY; 1.
DR PANTHER; PTHR30136:SF24; HTH-TYPE TRANSCRIPTIONAL REPRESSOR ALLR; 1.
DR Pfam; PF09339; HTH_IclR; 1.
DR Pfam; PF01614; IclR; 1.
DR SMART; SM00346; HTH_ICLR; 1.
DR SUPFAM; SSF55781; GAF domain-like; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS51077; HTH_ICLR; 1.
DR PROSITE; PS51078; ICLR_ED; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000017429};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 9..73
FT /note="HTH iclR-type"
FT /evidence="ECO:0000259|PROSITE:PS51077"
FT DOMAIN 74..258
FT /note="IclR-ED"
FT /evidence="ECO:0000259|PROSITE:PS51078"
SQ SEQUENCE 260 AA; 29492 MW; D4A7100AC176D31A CRC64;
MYKPNVNSIQ SVQHALQLFE VFRTNYDKDE FGVTELSKTL GLHKNNVFRL LATLSSCGYI
EQNPATENYR LGIGIFNLGQ KFINKLGFLR LARPFMEKIV SEIGESCYIG ILREGNVIYL
DLVEADHPVR IVSRVGKDVP AYCTSIGKVQ LAFSGEDELN KIYLGARLKR YTDYTITSLP
ELKKHLKEVN ANEYAIDNQE FEKNVCCIAV PIKDYLGIPV AAISVAGPCY RMSHDRLIND
ILPIEKKYAK EISKRLGYQN
//
