ID V4ARB8_LOTGI Unreviewed; 339 AA.
AC V4ARB8;
DT 22-JAN-2014, integrated into UniProtKB/TrEMBL.
DT 22-JAN-2014, sequence version 1.
DT 24-JAN-2024, entry version 50.
DE RecName: Full=HMG box domain-containing protein {ECO:0008006|Google:ProtNLM};
DE Flags: Fragment;
GN ORFNames=LOTGIDRAFT_144192 {ECO:0000313|EMBL:ESO96256.1};
OS Lottia gigantea (Giant owl limpet).
OC Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Gastropoda;
OC Patellogastropoda; Lottioidea; Lottiidae; Lottia.
OX NCBI_TaxID=225164 {ECO:0000313|EMBL:ESO96256.1, ECO:0000313|Proteomes:UP000030746};
RN [1] {ECO:0000313|EMBL:ESO96256.1, ECO:0000313|Proteomes:UP000030746}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23254933; DOI=10.1038/nature11696;
RA Simakov O., Marletaz F., Cho S.J., Edsinger-Gonzales E., Havlak P.,
RA Hellsten U., Kuo D.H., Larsson T., Lv J., Arendt D., Savage R.,
RA Osoegawa K., de Jong P., Grimwood J., Chapman J.A., Shapiro H., Aerts A.,
RA Otillar R.P., Terry A.Y., Boore J.L., Grigoriev I.V., Lindberg D.R.,
RA Seaver E.C., Weisblat D.A., Putnam N.H., Rokhsar D.S.;
RT "Insights into bilaterian evolution from three spiralian genomes.";
RL Nature 493:526-531(2013).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; KB201513; ESO96256.1; -; Genomic_DNA.
DR RefSeq; XP_009053065.1; XM_009054817.1.
DR AlphaFoldDB; V4ARB8; -.
DR STRING; 225164.V4ARB8; -.
DR EnsemblMetazoa; LotgiT144192; LotgiP144192; LotgiG144192.
DR GeneID; 20234799; -.
DR KEGG; lgi:LOTGIDRAFT_144192; -.
DR CTD; 20234799; -.
DR HOGENOM; CLU_820313_0_0_1; -.
DR OrthoDB; 2878065at2759; -.
DR Proteomes; UP000030746; Unassembled WGS sequence.
DR GO; GO:0016586; C:RSC-type complex; IEA:InterPro.
DR GO; GO:0003682; F:chromatin binding; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006338; P:chromatin remodeling; IEA:InterPro.
DR CDD; cd21984; HMG-box_PB1; 1.
DR Gene3D; 2.30.30.490; -; 1.
DR Gene3D; 1.10.30.10; High mobility group box domain; 1.
DR InterPro; IPR001025; BAH_dom.
DR InterPro; IPR043151; BAH_sf.
DR InterPro; IPR009071; HMG_box_dom.
DR InterPro; IPR036910; HMG_box_dom_sf.
DR InterPro; IPR037382; Rsc/polybromo.
DR PANTHER; PTHR16062:SF19; PROTEIN POLYBROMO-1; 1.
DR PANTHER; PTHR16062; SWI/SNF-RELATED; 1.
DR Pfam; PF01426; BAH; 1.
DR Pfam; PF00505; HMG_box; 1.
DR SMART; SM00398; HMG; 1.
DR SUPFAM; SSF47095; HMG-box; 1.
DR PROSITE; PS51038; BAH; 1.
DR PROSITE; PS50118; HMG_BOX_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00267};
KW Nucleus {ECO:0000256|PROSITE-ProRule:PRU00267};
KW Reference proteome {ECO:0000313|Proteomes:UP000030746}.
FT DOMAIN 1..64
FT /note="BAH"
FT /evidence="ECO:0000259|PROSITE:PS51038"
FT DOMAIN 140..208
FT /note="HMG box"
FT /evidence="ECO:0000259|PROSITE:PS50118"
FT DNA_BIND 140..208
FT /note="HMG box"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00267"
FT REGION 108..146
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 216..239
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:ESO96256.1"
SQ SEQUENCE 339 AA; 38210 MW; CB2A3D5AEA79344E CRC64;
LFYKHEVFLS SIEDTNPVQS IIGKCSVLHI KEYCSSRITE ISENDVYITE SKYLEAERTI
KKLGKGLKRY SLSPKVTDDE IYFFRKQILP QKEPSPLLIK ASEDLLGDAD DSQDGKSDLA
LSLDENSQTP SEKPKKRQSV KRQPSGYIVY AGEMRKQITH ENPEATFGEI SRLVGTRWRA
LPREDKEKYE ERAKVLAAQQ AVKQQEADKA FNDTLNRSQS PWSESGHISP GSIAAAPPRP
PSPMFVSVPP RTQRLLHSEA YLKYIEGLNA ESRTIGDWDK QLTCKPDNTP VPNEARLPTQ
WLSQGAGYHG SVTNALWALR NHMLKDTLAV ARALPYEAL
//
