GenomeNet

Database: UniProt
Entry: V4ARM6_LOTGI
LinkDB: V4ARM6_LOTGI
Original site: V4ARM6_LOTGI 
ID   V4ARM6_LOTGI            Unreviewed;      1065 AA.
AC   V4ARM6;
DT   22-JAN-2014, integrated into UniProtKB/TrEMBL.
DT   22-JAN-2014, sequence version 1.
DT   27-MAR-2024, entry version 51.
DE   SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ESO97495.1};
GN   ORFNames=LOTGIDRAFT_177207 {ECO:0000313|EMBL:ESO97495.1};
OS   Lottia gigantea (Giant owl limpet).
OC   Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Gastropoda;
OC   Patellogastropoda; Lottioidea; Lottiidae; Lottia.
OX   NCBI_TaxID=225164 {ECO:0000313|EMBL:ESO97495.1, ECO:0000313|Proteomes:UP000030746};
RN   [1] {ECO:0000313|EMBL:ESO97495.1, ECO:0000313|Proteomes:UP000030746}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=23254933; DOI=10.1038/nature11696;
RA   Simakov O., Marletaz F., Cho S.J., Edsinger-Gonzales E., Havlak P.,
RA   Hellsten U., Kuo D.H., Larsson T., Lv J., Arendt D., Savage R.,
RA   Osoegawa K., de Jong P., Grimwood J., Chapman J.A., Shapiro H., Aerts A.,
RA   Otillar R.P., Terry A.Y., Boore J.L., Grigoriev I.V., Lindberg D.R.,
RA   Seaver E.C., Weisblat D.A., Putnam N.H., Rokhsar D.S.;
RT   "Insights into bilaterian evolution from three spiralian genomes.";
RL   Nature 493:526-531(2013).
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DR   EMBL; KB201304; ESO97495.1; -; Genomic_DNA.
DR   RefSeq; XP_009051363.1; XM_009053115.1.
DR   AlphaFoldDB; V4ARM6; -.
DR   STRING; 225164.V4ARM6; -.
DR   EnsemblMetazoa; LotgiT177207; LotgiP177207; LotgiG177207.
DR   GeneID; 20244193; -.
DR   KEGG; lgi:LOTGIDRAFT_177207; -.
DR   CTD; 20244193; -.
DR   HOGENOM; CLU_006386_0_0_1; -.
DR   OMA; EHWLTIA; -.
DR   OrthoDB; 3573659at2759; -.
DR   Proteomes; UP000030746; Unassembled WGS sequence.
DR   GO; GO:0005634; C:nucleus; IEA:UniProt.
DR   GO; GO:0032991; C:protein-containing complex; IEA:UniProt.
DR   GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 5.
DR   InterPro; IPR031101; Ctr9.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   InterPro; IPR019734; TPR_repeat.
DR   PANTHER; PTHR14027; RNA POLYMERASE-ASSOCIATED PROTEIN CTR9; 1.
DR   PANTHER; PTHR14027:SF2; RNA POLYMERASE-ASSOCIATED PROTEIN CTR9 HOMOLOG; 1.
DR   Pfam; PF13374; TPR_10; 1.
DR   Pfam; PF13424; TPR_12; 1.
DR   Pfam; PF13432; TPR_16; 1.
DR   Pfam; PF14559; TPR_19; 1.
DR   Pfam; PF13181; TPR_8; 4.
DR   SMART; SM00028; TPR; 11.
DR   SUPFAM; SSF81901; HCP-like; 1.
DR   SUPFAM; SSF48452; TPR-like; 2.
DR   PROSITE; PS50005; TPR; 5.
DR   PROSITE; PS50293; TPR_REGION; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000030746};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   TPR repeat {ECO:0000256|ARBA:ARBA00022803, ECO:0000256|PROSITE-
KW   ProRule:PRU00339}.
FT   REPEAT          198..231
FT                   /note="TPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT   REPEAT          306..339
FT                   /note="TPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT   REPEAT          341..374
FT                   /note="TPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT   REPEAT          497..530
FT                   /note="TPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT   REPEAT          531..564
FT                   /note="TPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT   REGION          809..1065
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        809..832
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        846..863
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        908..951
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        952..1065
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1065 AA;  119170 MW;  3F46F1F80FD2D732 CRC64;
     MAAGSIEIPL RDTDEVIELD LDQLPEGDEV LSILRQEVAP LHIWVTLALE YYKQGFVEDF
     VKILESSRTD SGIDYQNFER DQMQSLDTLA AYYVQLAHKE KNKDTKRELF TKATLLYTTA
     DKIIMYDQNH LLGRAYFCLL EGDKMDQADA QFNFVLNQSS NNIPSLLGKA CIAFNKKEFR
     SSLAYYKKAL RTNPNCPASV RLGMGHCFVK LNRLEKARMA FERALQLDPQ CVGALVGLAI
     LELNSKAQDA IKNGVQLLSK AYTIDSSNPM VLNHLANHFF YKKDYQKVQF LALHAFHNTE
     NEAMRAESCY QLARAFHVQD DYDQAFQYYY QSTQFAPTNF VLPFFGLGQM YIYRGDNDNA
     SQCFERVLKA QPGNYETMKI LGSLYSNSFD QDKKDTAKQH LKKVTEQFPD DVEAWIELAQ
     ILEQSDVQGA LSAYGTATRI LKEKVQADVP PEILNNVAAL HFRLGNFQEA KKYYEASQER
     SRNEAQHDET YYSAISVTTT YNLARLYESL NEFDKADKLY RTILRDHPNY VDCYLRLGCM
     ARDRGQIYEA SDWFKEALQI NQDHPDAWSL IGNLHLAKHE WGPGQKKFER ILQRPGTKDD
     AYSLIALGNV WLQTLHQPMK DKAKEKRHQD RALAMYKQVL RNDDRNIWAA NGIGCVLAHK
     GCVGEGRDVF AQVREATADF CDVWLNIAHI YVEQKQYVAA VQMYENCLKK FFKSHNEEVM
     LYLARAYFRC GKLQECKTVL LKARHISPHD TVLLYNIALV QQKLATSILK DEKSNLKTVL
     TAVRDLELAH RYFSYLSQHG DRMKYDLNQA GLEARNRRDM SDSEDEGGDR RDKKRRKPRK
     GKEGKDKKKK EKEEDDGLSA KQRRKIVSKA YISSSNESGS EKEELQIADD GGSGSGSGSG
     NEGVSKKGRR IMSSDSDSDG EAAKSDNDRK SGSNRGSGSE SDRRSNKGSG SEKGSGKDSG
     SESDAGSVKS NASNKSNASK ASNRSAASHA SNASNRSAVS NASNRSAASN ASNKSGGSNA
     SNKSGGSPAS NKSGGSPASN HSDNEGGSKK GSDSGGESPA NENSD
//
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