ID V4JM34_9GAMM Unreviewed; 447 AA.
AC V4JM34;
DT 22-JAN-2014, integrated into UniProtKB/TrEMBL.
DT 22-JAN-2014, sequence version 1.
DT 24-JAN-2024, entry version 38.
DE RecName: Full=Excinuclease ABC subunit C {ECO:0008006|Google:ProtNLM};
DE Flags: Fragment;
GN ORFNames=N838_25085 {ECO:0000313|EMBL:ESQ16866.1};
OS Thiohalocapsa sp. PB-PSB1.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales; Chromatiaceae;
OC Thiohalocapsa.
OX NCBI_TaxID=1385625 {ECO:0000313|EMBL:ESQ16866.1, ECO:0000313|Proteomes:UP000017935};
RN [1] {ECO:0000313|EMBL:ESQ16866.1, ECO:0000313|Proteomes:UP000017935}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Wilbanks E.G., Jaekel U., Salman V., Humphrey P.T., Eisen J.A.,
RA Facciotti M.T., Buckley D.H., Zinder S.H., Druschel G.K., Fike D.A.,
RA Orphan V.J.;
RT "A sulfurous symbiosis: microscale sulfur cycling in the pink berry
RT consortia of the Sippewissett salt marsh.";
RL Submitted (AUG-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ESQ16866.1}.
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DR EMBL; AVFR01000112; ESQ16866.1; -; Genomic_DNA.
DR AlphaFoldDB; V4JM34; -.
DR Proteomes; UP000017935; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR GO; GO:0009380; C:excinuclease repair complex; IEA:InterPro.
DR GO; GO:0009381; F:excinuclease ABC activity; IEA:InterPro.
DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro.
DR GO; GO:0009432; P:SOS response; IEA:UniProtKB-KW.
DR CDD; cd10434; GIY-YIG_UvrC_Cho; 1.
DR Gene3D; 3.40.1440.10; GIY-YIG endonuclease; 1.
DR Gene3D; 4.10.860.10; UVR domain; 1.
DR Gene3D; 3.30.420.340; UvrC, RNAse H endonuclease domain; 1.
DR InterPro; IPR000305; GIY-YIG_endonuc.
DR InterPro; IPR035901; GIY-YIG_endonuc_sf.
DR InterPro; IPR047296; GIY-YIG_UvrC_Cho.
DR InterPro; IPR001943; UVR_dom.
DR InterPro; IPR036876; UVR_dom_sf.
DR InterPro; IPR004791; UvrC.
DR InterPro; IPR001162; UvrC_RNase_H_dom.
DR InterPro; IPR038476; UvrC_RNase_H_dom_sf.
DR NCBIfam; TIGR00194; uvrC; 1.
DR PANTHER; PTHR30562:SF1; UVRABC SYSTEM PROTEIN C; 1.
DR PANTHER; PTHR30562; UVRC/OXIDOREDUCTASE; 1.
DR Pfam; PF01541; GIY-YIG; 1.
DR Pfam; PF02151; UVR; 1.
DR Pfam; PF08459; UvrC_RNaseH_dom; 1.
DR SMART; SM00465; GIYc; 1.
DR SUPFAM; SSF46600; C-terminal UvrC-binding domain of UvrB; 1.
DR SUPFAM; SSF82771; GIY-YIG endonuclease; 1.
DR PROSITE; PS50164; GIY_YIG; 1.
DR PROSITE; PS50151; UVR; 1.
DR PROSITE; PS50165; UVRC; 1.
PE 4: Predicted;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW DNA excision {ECO:0000256|ARBA:ARBA00022769};
KW DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW Excision nuclease {ECO:0000256|ARBA:ARBA00022881};
KW Reference proteome {ECO:0000313|Proteomes:UP000017935};
KW SOS response {ECO:0000256|ARBA:ARBA00023236}.
FT DOMAIN 31..108
FT /note="GIY-YIG"
FT /evidence="ECO:0000259|PROSITE:PS50164"
FT DOMAIN 218..253
FT /note="UVR"
FT /evidence="ECO:0000259|PROSITE:PS50151"
FT DOMAIN 268..447
FT /note="UvrC family homology region profile"
FT /evidence="ECO:0000259|PROSITE:PS50165"
FT NON_TER 447
FT /evidence="ECO:0000313|EMBL:ESQ16866.1"
SQ SEQUENCE 447 AA; 50121 MW; 2FDF73D197BBACAD CRC64;
MSDPPAACPA SASCVQDQPF DHRAALKSIP GQPGVYRMLD ADGNVLYVGK AKDLKRRVGS
YFGRALNQRL LAMVSQIADI QVTLTRTEGE ALLLENNLIK EHRPRYNVLL RDDKSYPFIY
LSTEDDYPRL AFYRGARRGK GRYFGPYPSA WAVRETLQLL QKLFPVRQCE DSFFNNRSRP
CLQYQIKRCT APCVGFISAE DYAVDVQHSI KFLDGRTDEV VTELGERMQQ AAEALEFERA
AALRDQIATL QRIQQRQYVT GDGGDLDIVA AVEEGGSVCV QVFFIRAGRN LGNKAFFPQV
PDASSRATLL SAFLAQFYAD KPIPAEILVN AEPDERAFLE AAFSQQAGRR IAIRHRVRSD
RARWLEMAQS NAELALKSRL GSRAGYARRL QALRDMLSLA ELPSRMECFD ISHTQGELTV
ASCVVFDADG PRKSDYRRFN IDGIVAG
//
