GenomeNet

Database: UniProt
Entry: V4JXK0_EUTSA
LinkDB: V4JXK0_EUTSA
Original site: V4JXK0_EUTSA 
ID   V4JXK0_EUTSA            Unreviewed;       427 AA.
AC   V4JXK0;
DT   22-JAN-2014, integrated into UniProtKB/TrEMBL.
DT   22-JAN-2014, sequence version 1.
DT   24-JAN-2024, entry version 34.
DE   RecName: Full=RanBD1 domain-containing protein {ECO:0000259|PROSITE:PS50196};
GN   ORFNames=EUTSA_v10011504mg {ECO:0000313|EMBL:ESQ30210.1};
OS   Eutrema salsugineum (Saltwater cress) (Sisymbrium salsugineum).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema.
OX   NCBI_TaxID=72664 {ECO:0000313|EMBL:ESQ30210.1, ECO:0000313|Proteomes:UP000030689};
RN   [1] {ECO:0000313|EMBL:ESQ30210.1, ECO:0000313|Proteomes:UP000030689}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=23518688; DOI=10.3389/fpls.2013.00046;
RA   Yang R., Jarvis D.E., Chen H., Beilstein M.A., Grimwood J., Jenkins J.,
RA   Shu S., Prochnik S., Xin M., Ma C., Schmutz J., Wing R.A.,
RA   Mitchell-Olds T., Schumaker K.S., Wang X.;
RT   "The Reference Genome of the Halophytic Plant Eutrema salsugineum.";
RL   Front. Plant Sci. 4:46-46(2013).
CC   -!- SUBCELLULAR LOCATION: Nucleus, nuclear pore complex
CC       {ECO:0000256|ARBA:ARBA00004567}.
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DR   EMBL; KI517809; ESQ30210.1; -; Genomic_DNA.
DR   RefSeq; XP_006392924.1; XM_006392862.1.
DR   AlphaFoldDB; V4JXK0; -.
DR   STRING; 72664.V4JXK0; -.
DR   EnsemblPlants; ESQ30210; ESQ30210; EUTSA_v10011504mg.
DR   GeneID; 18011259; -.
DR   Gramene; ESQ30210; ESQ30210; EUTSA_v10011504mg.
DR   KEGG; eus:EUTSA_v10011504mg; -.
DR   eggNOG; KOG0864; Eukaryota.
DR   OMA; IRLVMRS; -.
DR   OrthoDB; 307490at2759; -.
DR   Proteomes; UP000030689; Unassembled WGS sequence.
DR   GO; GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
DR   GO; GO:0046907; P:intracellular transport; IEA:InterPro.
DR   GO; GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.
DR   GO; GO:0015031; P:protein transport; IEA:UniProtKB-KW.
DR   CDD; cd13169; RanBD_NUP50_plant; 1.
DR   Gene3D; 2.30.29.30; Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB); 1.
DR   InterPro; IPR015007; NUP2/50/61.
DR   InterPro; IPR011993; PH-like_dom_sf.
DR   InterPro; IPR000156; Ran_bind_dom.
DR   InterPro; IPR045207; RanBD_NUP50_plant.
DR   InterPro; IPR045255; RanBP1-like.
DR   PANTHER; PTHR23138:SF142; NUCLEAR PORE COMPLEX PROTEIN NUP50A-RELATED; 1.
DR   PANTHER; PTHR23138; RAN BINDING PROTEIN; 1.
DR   Pfam; PF08911; NUP50; 1.
DR   Pfam; PF00638; Ran_BP1; 1.
DR   SMART; SM00160; RanBD; 1.
DR   SUPFAM; SSF50729; PH domain-like; 1.
DR   PROSITE; PS50196; RANBD1; 1.
PE   4: Predicted;
KW   mRNA transport {ECO:0000256|ARBA:ARBA00022816};
KW   Nuclear pore complex {ECO:0000256|ARBA:ARBA00023132};
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW   Protein transport {ECO:0000256|ARBA:ARBA00023132};
KW   Reference proteome {ECO:0000313|Proteomes:UP000030689};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   Translocation {ECO:0000256|ARBA:ARBA00023010};
KW   Transport {ECO:0000256|ARBA:ARBA00022816}.
FT   DOMAIN          281..401
FT                   /note="RanBD1"
FT                   /evidence="ECO:0000259|PROSITE:PS50196"
FT   REGION          1..45
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          83..215
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          406..427
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        114..142
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        143..173
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        174..201
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   427 AA;  45420 MW;  B32AAA02B5FCC11A CRC64;
     MGDSENAQPP SKKRGALKQL SRENPGLDDE EDSAELESGT FKKASDEVLA SRRIVRVKRK
     EPSAPPAASL NPFAGIQLVP ASAPASTTPL AESKLAPAEA VVEEDDQKVT DTEEEDEVDS
     KKVDNVKDSA GEETEKAKDN QCGKTSDTQV TDADVNQTVS SVTNISNAVE GTDQTEDPLE
     KKDSGGDQSE RKEESEEADK NGDNGALSSF QQHSSSKNAF TGLASTEASG SSFSFGLVSQ
     DGSTGSGSLF GFGLQNSNNS SLFGASGASI IKKSSEGTAF PPKEEVSTET GEENEKVTFS
     ADSIMFEYLD GGWKERGKGE VKVNVSSNGG KARLVMRAKG NYRLILNASL YPEMKLASMD
     KKGITFACVN SVSEGKEGLS TFALKFKDPT IVEEFRVAID KHKDNKPIEE TTLPLKTPEN
     SPTATDA
//
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