ID V4L729_EUTSA Unreviewed; 239 AA.
AC V4L729;
DT 22-JAN-2014, integrated into UniProtKB/TrEMBL.
DT 22-JAN-2014, sequence version 1.
DT 27-MAR-2024, entry version 45.
DE RecName: Full=Short vegetative phase protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=EUTSA_v10000308mg {ECO:0000313|EMBL:ESQ46170.1};
OS Eutrema salsugineum (Saltwater cress) (Sisymbrium salsugineum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema.
OX NCBI_TaxID=72664 {ECO:0000313|EMBL:ESQ46170.1, ECO:0000313|Proteomes:UP000030689};
RN [1] {ECO:0000313|EMBL:ESQ46170.1, ECO:0000313|Proteomes:UP000030689}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23518688; DOI=10.3389/fpls.2013.00046;
RA Yang R., Jarvis D.E., Chen H., Beilstein M.A., Grimwood J., Jenkins J.,
RA Shu S., Prochnik S., Xin M., Ma C., Schmutz J., Wing R.A.,
RA Mitchell-Olds T., Schumaker K.S., Wang X.;
RT "The Reference Genome of the Halophytic Plant Eutrema salsugineum.";
RL Front. Plant Sci. 4:46-46(2013).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; KI517426; ESQ46170.1; -; Genomic_DNA.
DR RefSeq; XP_006404717.1; XM_006404654.1.
DR AlphaFoldDB; V4L729; -.
DR STRING; 72664.V4L729; -.
DR EnsemblPlants; ESQ46170; ESQ46170; EUTSA_v10000308mg.
DR GeneID; 18021815; -.
DR Gramene; ESQ46170; ESQ46170; EUTSA_v10000308mg.
DR KEGG; eus:EUTSA_v10000308mg; -.
DR eggNOG; KOG0014; Eukaryota.
DR OMA; QIYNNVH; -.
DR OrthoDB; 448298at2759; -.
DR Proteomes; UP000030689; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0000900; F:mRNA regulatory element binding translation repressor activity; IEA:EnsemblPlants.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0000977; F:RNA polymerase II transcription regulatory region sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0045892; P:negative regulation of DNA-templated transcription; IEA:EnsemblPlants.
DR GO; GO:0009910; P:negative regulation of flower development; IEA:EnsemblPlants.
DR GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; IEA:InterPro.
DR GO; GO:0009266; P:response to temperature stimulus; IEA:EnsemblPlants.
DR CDD; cd00265; MADS_MEF2_like; 1.
DR Gene3D; 3.40.1810.10; Transcription factor, MADS-box; 1.
DR InterPro; IPR033896; MADS_MEF2-like.
DR InterPro; IPR002487; TF_Kbox.
DR InterPro; IPR002100; TF_MADSbox.
DR InterPro; IPR036879; TF_MADSbox_sf.
DR PANTHER; PTHR48019:SF101; MADS-BOX PROTEIN JOINTLESS; 1.
DR PANTHER; PTHR48019; SERUM RESPONSE FACTOR HOMOLOG; 1.
DR Pfam; PF01486; K-box; 1.
DR Pfam; PF00319; SRF-TF; 1.
DR PRINTS; PR00404; MADSDOMAIN.
DR SMART; SM00432; MADS; 1.
DR SUPFAM; SSF55455; SRF-like; 1.
DR PROSITE; PS51297; K_BOX; 1.
DR PROSITE; PS00350; MADS_BOX_1; 1.
DR PROSITE; PS50066; MADS_BOX_2; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000030689};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 1..61
FT /note="MADS-box"
FT /evidence="ECO:0000259|PROSITE:PS50066"
FT DOMAIN 87..180
FT /note="K-box"
FT /evidence="ECO:0000259|PROSITE:PS51297"
FT REGION 203..239
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 150..184
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 203..231
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 239 AA; 26976 MW; F084B032566A4E98 CRC64;
MAREKIQIRK IDNATARQVT FSKRRRGLFK KAEELSVLCD ADVALIIFSS TGKLFEFCSS
SMKEVLERHN LQSKNLEKLD QPSLELQLVE NSDHARMSKE IADKSNRLRQ MRGEELLGLN
IEELQQLEKA LEAGLTRVIE TKSEKIMTEI GELQRKGMQL MDENKRLRQQ GTQLTEENER
LGKQICNNVH ERNVGIESEN TAVYEEGHSS ESITNAGNGA PVDSESSDTS LRLGLPYGG
//
