ID V4LDV3_EUTSA Unreviewed; 627 AA.
AC V4LDV3;
DT 22-JAN-2014, integrated into UniProtKB/TrEMBL.
DT 22-JAN-2014, sequence version 1.
DT 27-MAR-2024, entry version 36.
DE RecName: Full=DYW domain-containing protein {ECO:0000259|Pfam:PF14432};
GN ORFNames=EUTSA_v10020299mg {ECO:0000313|EMBL:ESQ48625.1};
OS Eutrema salsugineum (Saltwater cress) (Sisymbrium salsugineum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema.
OX NCBI_TaxID=72664 {ECO:0000313|EMBL:ESQ48625.1, ECO:0000313|Proteomes:UP000030689};
RN [1] {ECO:0000313|EMBL:ESQ48625.1, ECO:0000313|Proteomes:UP000030689}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23518688; DOI=10.3389/fpls.2013.00046;
RA Yang R., Jarvis D.E., Chen H., Beilstein M.A., Grimwood J., Jenkins J.,
RA Shu S., Prochnik S., Xin M., Ma C., Schmutz J., Wing R.A.,
RA Mitchell-Olds T., Schumaker K.S., Wang X.;
RT "The Reference Genome of the Halophytic Plant Eutrema salsugineum.";
RL Front. Plant Sci. 4:46-46(2013).
CC -!- SIMILARITY: Belongs to the PPR family. PCMP-H subfamily.
CC {ECO:0000256|ARBA:ARBA00006643}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; KI517408; ESQ48625.1; -; Genomic_DNA.
DR RefSeq; XP_006407172.1; XM_006407109.1.
DR AlphaFoldDB; V4LDV3; -.
DR EnsemblPlants; ESQ48625; ESQ48625; EUTSA_v10020299mg.
DR GeneID; 18024512; -.
DR Gramene; ESQ48625; ESQ48625; EUTSA_v10020299mg.
DR KEGG; eus:EUTSA_v10020299mg; -.
DR eggNOG; KOG4197; Eukaryota.
DR OMA; EGMQSNY; -.
DR OrthoDB; 452546at2759; -.
DR Proteomes; UP000030689; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR045215; PPR_prot_At1g15510.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 4.
DR PANTHER; PTHR24015:SF1693; DYW DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR24015; OS07G0578800 PROTEIN-RELATED; 1.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 1.
DR Pfam; PF12854; PPR_1; 1.
DR Pfam; PF13041; PPR_2; 3.
DR PROSITE; PS51375; PPR; 4.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000030689};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 116..150
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 217..251
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 318..352
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 391..421
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 535..627
FT /note="DYW"
FT /evidence="ECO:0000259|Pfam:PF14432"
SQ SEQUENCE 627 AA; 70602 MW; 01B3AB12FA2837E9 CRC64;
MSHFIGLFHR SFSSFPNSAL ETVLPIPQLC SNGRLQEALL KMSVLGHEMG FHGYDALLNA
CLDKRALRQG QRVHAHMIKT CYLPATYLRT RLLIFYGKCD CLKDARKVLD EMPEKNVVSW
TAMISRYSQT GHSSEALAVF AEMMRSDEKP NEFTFATVLT SCIRASGISL GKQLHGLLVK
WNYVSHIFVG SSLLDMYAKA GEIVEAREIF ECLPERDVVS CTAIIAGYAQ LGLDEEALEM
FQKLQSKGLS PNYVTYASVL TALSGLALLD HGKQAHCHVL RRELPFYAVL QNSLIDMYSK
CGNLSYARRL FDNMPERTAI SWNAMLVGYS KHGLGNEVLE LFRLMRDEKR VKPDSVTLLA
VLSGCSHGRM EDTGLSIFDG MIAGDYGIKP DTEHYGCIVD MLGRAGRIEE AFEFIKRMPS
EATAGVLGSL LGACRVHLSV DIGESVGRRL IEIEPENAGN YVILSNLYAS TGRWEEVNNL
RALMMQKAVT KEPGRSWIQH EQTLHYFHAN DRTHPRREEV LDKLKEILIK MKQAGYVPDP
SCVLYDVDEE QKEKMLLGHS EKLALTFGLI ATGKGTPIRV FKNLRICVDC HNFAKIFSNV
FEREVSLRDK NRFHQIVGGK CSCRDYW
//
