ID V4LG80_EUTSA Unreviewed; 319 AA.
AC V4LG80;
DT 22-JAN-2014, integrated into UniProtKB/TrEMBL.
DT 22-JAN-2014, sequence version 1.
DT 27-MAR-2024, entry version 30.
DE RecName: Full=U1-type domain-containing protein {ECO:0000259|SMART:SM00451};
DE Flags: Fragment;
GN ORFNames=EUTSA_v10022198mg {ECO:0000313|EMBL:ESQ49485.1};
OS Eutrema salsugineum (Saltwater cress) (Sisymbrium salsugineum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema.
OX NCBI_TaxID=72664 {ECO:0000313|EMBL:ESQ49485.1, ECO:0000313|Proteomes:UP000030689};
RN [1] {ECO:0000313|EMBL:ESQ49485.1, ECO:0000313|Proteomes:UP000030689}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23518688; DOI=10.3389/fpls.2013.00046;
RA Yang R., Jarvis D.E., Chen H., Beilstein M.A., Grimwood J., Jenkins J.,
RA Shu S., Prochnik S., Xin M., Ma C., Schmutz J., Wing R.A.,
RA Mitchell-Olds T., Schumaker K.S., Wang X.;
RT "The Reference Genome of the Halophytic Plant Eutrema salsugineum.";
RL Front. Plant Sci. 4:46-46(2013).
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DR EMBL; KI517408; ESQ49485.1; -; Genomic_DNA.
DR RefSeq; XP_006408032.1; XM_006407969.1.
DR AlphaFoldDB; V4LG80; -.
DR STRING; 72664.V4LG80; -.
DR EnsemblPlants; ESQ49485; ESQ49485; EUTSA_v10022198mg.
DR Gramene; ESQ49485; ESQ49485; EUTSA_v10022198mg.
DR KEGG; eus:EUTSA_v10022198mg; -.
DR eggNOG; KOG4727; Eukaryota.
DR Proteomes; UP000030689; Unassembled WGS sequence.
DR GO; GO:0005681; C:spliceosomal complex; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0000398; P:mRNA splicing, via spliceosome; IEA:InterPro.
DR Gene3D; 3.30.160.60; Classic Zinc Finger; 1.
DR InterPro; IPR003604; Matrin/U1-like-C_Znf_C2H2.
DR InterPro; IPR040107; Snu23.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR InterPro; IPR013087; Znf_C2H2_type.
DR PANTHER; PTHR45986; ZINC FINGER MATRIN-TYPE PROTEIN 2; 1.
DR PANTHER; PTHR45986:SF1; ZINC FINGER MATRIN-TYPE PROTEIN 2; 1.
DR Pfam; PF12874; zf-met; 1.
DR SMART; SM00451; ZnF_U1; 1.
DR SUPFAM; SSF57667; beta-beta-alpha zinc fingers; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000030689};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771}.
FT DOMAIN 174..208
FT /note="U1-type"
FT /evidence="ECO:0000259|SMART:SM00451"
FT REGION 271..319
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:ESQ49485.1"
SQ SEQUENCE 319 AA; 37044 MW; 3CE3F229AF437EA3 CRC64;
TVKLIIIVKE IAVFVRDRKK LGRIYIHISV SSPSSNLLPL CSTMASSNTT TTGVDNTFRK
KFDTEEYRER ARERENKESD RSKSRCKATS LIWLMKKKLK FLKSMMSLTR VVVAAKGPPV
QRAPLKHRDY HVDLESRLGK TQVVTPVAPL SQQVMAVSRF TRKYDLKKTL VVTRAGYFCR
VCECVVKDSA NYLDHINGKK HQRALGMSMR VERSSLEQVQ ERFEVLKKRK TPGTFTEQEN
RNYSLMHSRF RISEFAHDMG IDLDERIRKQ QEEEEELKRQ RREKKKEKKK GKVMEEEPEM
DPEVAEMMGF GGFGSSKKS
//
