ID V4LY07_EUTSA Unreviewed; 2031 AA.
AC V4LY07;
DT 22-JAN-2014, integrated into UniProtKB/TrEMBL.
DT 22-JAN-2014, sequence version 1.
DT 27-MAR-2024, entry version 45.
DE RecName: Full=Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 {ECO:0008006|Google:ProtNLM};
GN ORFNames=EUTSA_v10019875mg {ECO:0000313|EMBL:ESQ48744.1};
OS Eutrema salsugineum (Saltwater cress) (Sisymbrium salsugineum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema.
OX NCBI_TaxID=72664 {ECO:0000313|EMBL:ESQ48744.1, ECO:0000313|Proteomes:UP000030689};
RN [1] {ECO:0000313|EMBL:ESQ48744.1, ECO:0000313|Proteomes:UP000030689}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23518688; DOI=10.3389/fpls.2013.00046;
RA Yang R., Jarvis D.E., Chen H., Beilstein M.A., Grimwood J., Jenkins J.,
RA Shu S., Prochnik S., Xin M., Ma C., Schmutz J., Wing R.A.,
RA Mitchell-Olds T., Schumaker K.S., Wang X.;
RT "The Reference Genome of the Halophytic Plant Eutrema salsugineum.";
RL Front. Plant Sci. 4:46-46(2013).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the EAF1 family.
CC {ECO:0000256|ARBA:ARBA00008913}.
CC -!- SIMILARITY: Belongs to the SNF2/RAD54 helicase family. ISWI subfamily.
CC {ECO:0000256|ARBA:ARBA00009687}.
CC -!- SIMILARITY: Belongs to the SNF2/RAD54 helicase family. SWR1 subfamily.
CC {ECO:0000256|ARBA:ARBA00009220}.
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DR EMBL; KI517408; ESQ48744.1; -; Genomic_DNA.
DR RefSeq; XP_006407291.1; XM_006407228.1.
DR STRING; 72664.V4LY07; -.
DR EnsemblPlants; ESQ48744; ESQ48744; EUTSA_v10019875mg.
DR GeneID; 18025082; -.
DR Gramene; ESQ48744; ESQ48744; EUTSA_v10019875mg.
DR KEGG; eus:EUTSA_v10019875mg; -.
DR eggNOG; KOG0391; Eukaryota.
DR OMA; VCWCSKS; -.
DR OrthoDB; 5475375at2759; -.
DR Proteomes; UP000030689; Unassembled WGS sequence.
DR GO; GO:0035267; C:NuA4 histone acetyltransferase complex; IEA:UniProt.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0140658; F:ATP-dependent chromatin remodeler activity; IEA:InterPro.
DR CDD; cd18003; DEXQc_SRCAP; 1.
DR CDD; cd18793; SF2_C_SNF; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 1.20.120.850; SWI2/SNF2 ATPases, N-terminal domain; 1.
DR Gene3D; 3.40.50.10810; Tandem AAA-ATPase domain; 1.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR014012; HSA_dom.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR001005; SANT/Myb.
DR InterPro; IPR038718; SNF2-like_sf.
DR InterPro; IPR049730; SNF2/RAD54-like_C.
DR InterPro; IPR000330; SNF2_N.
DR PANTHER; PTHR45685:SF1; HELICASE SRCAP; 1.
DR PANTHER; PTHR45685; HELICASE SRCAP-RELATED; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF07529; HSA; 1.
DR Pfam; PF00176; SNF2-rel_dom; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SMART; SM00573; HSA; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
DR PROSITE; PS51204; HSA; 1.
DR PROSITE; PS50090; MYB_LIKE; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Chromatin regulator {ECO:0000256|ARBA:ARBA00022853};
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000030689}.
FT DOMAIN 35..107
FT /note="HSA"
FT /evidence="ECO:0000259|PROSITE:PS51204"
FT DOMAIN 524..689
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 1055..1208
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT DOMAIN 1652..1706
FT /note="Myb-like"
FT /evidence="ECO:0000259|PROSITE:PS50090"
FT REGION 1..46
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 188..251
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 264..314
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 364..385
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 413..454
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1272..1293
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1524..1615
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1939..1960
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 78..108
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 21..46
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 212..229
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 230..247
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 264..296
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 413..441
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1275..1293
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1549..1565
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 2031 AA; 231156 MW; 6693F1F34D46CF72 CRC64;
MASKGGKSKP DIVMASKGAK SKPDSDSRAK RQKTLEAPKE PRRPKTHWDH VLEEMLWLSK
DFESERKWKL AQAKRVALRA SKGMLDQASR EERKLKEEEL RLRKVALNIS KDVKKFWMKV
EKLVLYKHQL VRNEKKKKAM DKQLEFLLGQ TERYSTMLAE NLVEPLKPGQ NNSPNTLLAI
QSKIDEERAE EIPSELNASA GLDPGTLDID EDYDLKSEDE SEDDEDTIEE DEKHFTKQER
QEELDALQNE VDLPVEELLR RYTAGRVSRE TSPEEEENKA NLASVGEEHI EADENNLTAS
EEIEGSPSVR RSNDSRVHLA ISETHSHDQE PGTITASVKS EKEDHTYDFN DEQEDVDFVV
ATGEEKDDET TLSVEEELAK ADNEDSVDEI ALLQKESEIP IEELLARYKQ DFGDKDLSED
DSGYSSALSE DDSHKIRQQA NSDDENVVST GYKPDLQPCS EKVEGISNEI TEDSSDKIAD
AAAAARSAQP TGFTYSTTKV RTKLPFLLKH SLREYQHIGL DWLVTMYEKR LNGILADEMG
LGKTIMTIAL LAHLACDKGI WGPHLIVVPT SVMLNWETEF LKWCPAFKIL TYFGSAKERK
LKRQGWMKLN SFHVCITTYR LVIQDSKMFK RKKWKYLILD EAHLIKNWKS QRWQTLLNFN
SKRRILLTGT PLQNDLMELW SLMHFLMPHV FQSHQEFKDW FCNPIAGMVE GQEKINKEVI
DRLHNVLRPF LLRRLKRDVE KQLPLKHEHV IFCRLSKRQR NLYEDFIAST ETQATLNSGS
FFGMISIIMQ LRKVCNHPDL FEGRPIVSSF DMAGIDLQLS SKICSLQLKS PFSKVDLEAL
GFLFTHLDFS MTAWEGDEIK AISTPPDLIK QRVDLKDNPE VIPLSLMNRK NLQETNIFEE
IRKAVFEERV KESKDRAAAI AWWNSLRCQR KPTYSTSLRT LLTVKGPLDD IHHLKANCSS
YMYSSMLADI VLSPIERFQK IIEVVEAFTF AIPAARVPSP ACWCSKSDAP VFFSPSYKEK
VTDLLSPLLS PIRPAIVRRQ VYFPDRRLIQ FDCGKLQELA ILLRKLKFGG HRALIFTQMT
KMLDILEAFI NLYGYTYMRL DGSTPPEERQ TLMQRFNTNP KIFLFILSTR SGGVGINLVG
ADTVIFYDSD WNPAMDQQAQ DRCHRIGQTR EVHIYRLISE STIEENILKK ANQKRALDNL
VIQNGEYNTE FFKKLDPMEL FSGHKALATK DEKQKSKKCG AELPLSDADV EAALKHAEDE
ADYMALKRVE EEEAVDNQEF TEEPVERPED DELVNEDDIK CDEPADQGVA AAGSSKQEIS
LLPTENKDER ADITISSQDE DTDVPDDVKQ MAAAAAAAGQ AISSFENQLR PIDRYAIRFL
EVWDPIIVEA AMENEAGFEE KEWELDHIEK YKEEMEAEID DGEEPLVYEK WDADFATEAY
RQQVEALAQH QLMEDLENEA REREAAEAAD MDLTLNESAH ILKPKKKKKV KKAKYKSLKK
GSLAAESKHV KSVVKVEITT DDDNEECGYV SSSDSDMGSP HFHRRMKGKK RELIVDTEEE
KTSTKKAKKH KKSLSHSDIK YKEQSAPHDE LVPSKPSDSM AADNELKPAN RGKTIGKKSI
TSMPIKRVLM IKPEKLKKGN LWSRDCVPPP DSWLPQEDAI LCAMVHEYGP NWSLVSETLY
GMAAGGAYRG RYRHPAYCCE RYRELIQRHI LSASDNVVNE KNLNTGSGKA LLKVTEENIR
ALLNVAAEQQ DTEMLLQKHF TCLLSSIWKT STRTGNDQML SLNSPIFNRQ FMGSANHTQE
LGRKPFQGMK ITSLSSKLLE SALQDSSMSQ PLDTVSRSRL QEDLPINKVG LDLTLEFPRG
NDDSPTHFPP IVRLSIDGSE SLNNVNDPSG EDKLKASRVA AENRYRNASN ACIEDSFGWA
SNTFPANDLK PRTGMKVQSL GKHKLSASDT PKSTKSKQRK LSAAEQFEVA WVRPNDPNLK
FDFTPADREE EEEDKVVAEE IEMIGCSHWY DPSLTLGLDD CPLASEFSEI E
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