ID V4MLY5_EUTSA Unreviewed; 429 AA.
AC V4MLY5;
DT 22-JAN-2014, integrated into UniProtKB/TrEMBL.
DT 22-JAN-2014, sequence version 1.
DT 27-MAR-2024, entry version 36.
DE RecName: Full=Histone deacetylase domain-containing protein {ECO:0000259|Pfam:PF00850};
GN ORFNames=EUTSA_v10025266mg {ECO:0000313|EMBL:ESQ53808.1};
OS Eutrema salsugineum (Saltwater cress) (Sisymbrium salsugineum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema.
OX NCBI_TaxID=72664 {ECO:0000313|EMBL:ESQ53808.1, ECO:0000313|Proteomes:UP000030689};
RN [1] {ECO:0000313|EMBL:ESQ53808.1, ECO:0000313|Proteomes:UP000030689}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23518688; DOI=10.3389/fpls.2013.00046;
RA Yang R., Jarvis D.E., Chen H., Beilstein M.A., Grimwood J., Jenkins J.,
RA Shu S., Prochnik S., Xin M., Ma C., Schmutz J., Wing R.A.,
RA Mitchell-Olds T., Schumaker K.S., Wang X.;
RT "The Reference Genome of the Halophytic Plant Eutrema salsugineum.";
RL Front. Plant Sci. 4:46-46(2013).
CC -!- COFACTOR:
CC Name=Zn(2+); Xref=ChEBI:CHEBI:29105;
CC Evidence={ECO:0000256|ARBA:ARBA00001947};
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DR EMBL; KI517384; ESQ53808.1; -; Genomic_DNA.
DR RefSeq; XP_006412355.1; XM_006412292.1.
DR AlphaFoldDB; V4MLY5; -.
DR STRING; 72664.V4MLY5; -.
DR EnsemblPlants; ESQ53808; ESQ53808; EUTSA_v10025266mg.
DR GeneID; 18029286; -.
DR Gramene; ESQ53808; ESQ53808; EUTSA_v10025266mg.
DR KEGG; eus:EUTSA_v10025266mg; -.
DR eggNOG; KOG1343; Eukaryota.
DR OMA; CTSPAMG; -.
DR OrthoDB; 124800at2759; -.
DR Proteomes; UP000030689; Unassembled WGS sequence.
DR GO; GO:0009570; C:chloroplast stroma; IEA:EnsemblPlants.
DR GO; GO:0005829; C:cytosol; IEA:EnsemblPlants.
DR GO; GO:0005739; C:mitochondrion; IEA:EnsemblPlants.
DR GO; GO:0005634; C:nucleus; IEA:EnsemblPlants.
DR GO; GO:0043014; F:alpha-tubulin binding; IEA:EnsemblPlants.
DR GO; GO:0048487; F:beta-tubulin binding; IEA:EnsemblPlants.
DR GO; GO:0004407; F:histone deacetylase activity; IEA:UniProtKB-EC.
DR GO; GO:0051721; F:protein phosphatase 2A binding; IEA:EnsemblPlants.
DR GO; GO:0043621; F:protein self-association; IEA:EnsemblPlants.
DR GO; GO:0042903; F:tubulin deacetylase activity; IEA:EnsemblPlants.
DR GO; GO:0030186; P:melatonin metabolic process; IEA:EnsemblPlants.
DR GO; GO:0042548; P:regulation of photosynthesis, light reaction; IEA:EnsemblPlants.
DR CDD; cd09992; HDAC_classII; 1.
DR Gene3D; 3.40.800.20; Histone deacetylase domain; 1.
DR InterPro; IPR000286; His_deacetylse.
DR InterPro; IPR023801; His_deacetylse_dom.
DR InterPro; IPR037138; His_deacetylse_dom_sf.
DR InterPro; IPR023696; Ureohydrolase_dom_sf.
DR PANTHER; PTHR10625:SF4; HISTONE DEACETYLASE 6, ISOFORM G; 1.
DR PANTHER; PTHR10625; HISTONE DEACETYLASE HDAC1-RELATED; 1.
DR Pfam; PF00850; Hist_deacetyl; 1.
DR PRINTS; PR01270; HDASUPER.
DR SUPFAM; SSF52768; Arginase/deacetylase; 1.
PE 4: Predicted;
KW Chromatin regulator {ECO:0000256|ARBA:ARBA00022853};
KW Reference proteome {ECO:0000313|Proteomes:UP000030689};
KW Repressor {ECO:0000256|ARBA:ARBA00022491};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 86..391
FT /note="Histone deacetylase"
FT /evidence="ECO:0000259|Pfam:PF00850"
SQ SEQUENCE 429 AA; 46177 MW; DB37408A11FF15F6 CRC64;
MLMALTVRPL YVPQSGGSSG TRNICRKKNQ NGMGLWRKHL VKPNGASICC SFGTEKDPLL
PCTQQLTDAR LIYCVSAALG HNKESHPECS ARVPAIVTAL DKNELTPKFR GSEILELVNF
KNATIEDIAN VHEKAYVLGL EKAMDEASDS GLIFIEGSGP TYATSTTFQD SLIAAGAGMA
LVDSVIAASI NSKDPPTGFA LIRPPGHHAV PKGPMGFCVF GNVAIAARHA QRAYGLKRVF
IIDFDVHHGN GTNDAFSEDP DIFFLSTHQD GSYPGTGKIS DIGKGKGEGT TLNLPLPGGS
GDIAMRTAFE EIIVPCVQRF KPDLILVSAG YDAHVLDPLA NLQFTTGTYY SLAKDIKRLA
KEVCGGRCVF FLEGGYNLES LSSSVADSFR ALLGEESLAS EFDNPAYLYD EPMRKVRDAI
ERAKSIHCL
//
