ID V4N3Z2_EUTSA Unreviewed; 564 AA.
AC V4N3Z2;
DT 22-JAN-2014, integrated into UniProtKB/TrEMBL.
DT 22-JAN-2014, sequence version 1.
DT 24-JAN-2024, entry version 36.
DE RecName: Full=VHS domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=EUTSA_v10015861mg {ECO:0000313|EMBL:ESQ40036.1};
OS Eutrema salsugineum (Saltwater cress) (Sisymbrium salsugineum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema.
OX NCBI_TaxID=72664 {ECO:0000313|EMBL:ESQ40036.1, ECO:0000313|Proteomes:UP000030689};
RN [1] {ECO:0000313|EMBL:ESQ40036.1, ECO:0000313|Proteomes:UP000030689}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23518688; DOI=10.3389/fpls.2013.00046;
RA Yang R., Jarvis D.E., Chen H., Beilstein M.A., Grimwood J., Jenkins J.,
RA Shu S., Prochnik S., Xin M., Ma C., Schmutz J., Wing R.A.,
RA Mitchell-Olds T., Schumaker K.S., Wang X.;
RT "The Reference Genome of the Halophytic Plant Eutrema salsugineum.";
RL Front. Plant Sci. 4:46-46(2013).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004170};
CC Peripheral membrane protein {ECO:0000256|ARBA:ARBA00004170}.
CC -!- SIMILARITY: Belongs to the TOM1 family.
CC {ECO:0000256|ARBA:ARBA00007708}.
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DR EMBL; KI517464; ESQ40036.1; -; Genomic_DNA.
DR RefSeq; XP_006398583.1; XM_006398520.1.
DR AlphaFoldDB; V4N3Z2; -.
DR STRING; 72664.V4N3Z2; -.
DR EnsemblPlants; ESQ40036; ESQ40036; EUTSA_v10015861mg.
DR GeneID; 18018361; -.
DR Gramene; ESQ40036; ESQ40036; EUTSA_v10015861mg.
DR KEGG; eus:EUTSA_v10015861mg; -.
DR eggNOG; KOG1087; Eukaryota.
DR OMA; WQCKDAI; -.
DR OrthoDB; 620063at2759; -.
DR Proteomes; UP000030689; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0035091; F:phosphatidylinositol binding; IEA:InterPro.
DR GO; GO:0043130; F:ubiquitin binding; IEA:InterPro.
DR GO; GO:0043328; P:protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway; IEA:InterPro.
DR CDD; cd14231; GAT_GGA-like_plant; 1.
DR CDD; cd03561; VHS; 1.
DR Gene3D; 1.20.58.160; -; 1.
DR Gene3D; 1.25.40.90; -; 1.
DR InterPro; IPR008942; ENTH_VHS.
DR InterPro; IPR004152; GAT_dom.
DR InterPro; IPR038425; GAT_sf.
DR InterPro; IPR044836; TOL_plant.
DR InterPro; IPR002014; VHS_dom.
DR PANTHER; PTHR45898; TOM1-LIKE PROTEIN; 1.
DR PANTHER; PTHR45898:SF13; TOM1-LIKE PROTEIN 7; 1.
DR Pfam; PF03127; GAT; 1.
DR Pfam; PF00790; VHS; 1.
DR SMART; SM00288; VHS; 1.
DR SUPFAM; SSF48464; ENTH/VHS domain; 1.
DR SUPFAM; SSF89009; GAT-like domain; 1.
DR PROSITE; PS50909; GAT; 1.
DR PROSITE; PS50179; VHS; 1.
PE 3: Inferred from homology;
KW Protein transport {ECO:0000256|ARBA:ARBA00022927};
KW Reference proteome {ECO:0000313|Proteomes:UP000030689};
KW Transport {ECO:0000256|ARBA:ARBA00022448}.
FT DOMAIN 29..158
FT /note="VHS"
FT /evidence="ECO:0000259|PROSITE:PS50179"
FT DOMAIN 195..283
FT /note="GAT"
FT /evidence="ECO:0000259|PROSITE:PS50909"
FT REGION 294..332
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 347..373
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 411..431
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 294..322
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 564 AA; 62313 MW; F058198E6203E8A5 CRC64;
MRPSSSSSSS SSASPSLTLS SVAVAVDKAT SELLLTPDWT MIIAICDSVN INRWQCKDAI
KAVKRRLQHK SSKVQLLTLT LLEAMLKNCG DFVHTHIAQK HLLEDMVKIV RKKGDYGVRN
RILVLLDTWN EAFSGAARKY PHYNWAYQEL TRSGVKFPQR SKEAPLMLAP PPASSSMNLM
SIGSFRSLDE TMATDIECLS FSSLDSMRNV MDLLNDMVQA LNPSDKSALK DELIVDLVEQ
CRSNQKKLIQ MLTTTADEDV MARGLELNDS LQVVLARHDA IASGVFLPTL QAPETRETSS
VLESGDASAA LESEPSSSSS SESETDDGED VENDFTQLSK RHALLNAQYS DEEEEEETLL
LGNSNEKTAE SETNTQCKDL ALFDKTATTT TKSEQDIIEL LSLTLSTTAL PASSQTQTQT
QTQPPSNTHH KTSYDHILMN SYVVPWAQTQ AEEPQVPKTA QFAPSGPQYQ AWPPQQQFSY
GYPHPQWNGG QANSYDTTFW SQGGSENKVF ERNLHYSNSF PARAAGPSAA VDGPPHRPPY
VPPYKLFEDL NVFCNRDGGV RSSK
//
