ID V4NNI5_EUTSA Unreviewed; 1326 AA.
AC V4NNI5;
DT 22-JAN-2014, integrated into UniProtKB/TrEMBL.
DT 22-JAN-2014, sequence version 1.
DT 27-MAR-2024, entry version 37.
DE RecName: Full=Protein TONSOKU {ECO:0008006|Google:ProtNLM};
GN ORFNames=EUTSA_v10019906mg {ECO:0000313|EMBL:ESQ48026.1};
OS Eutrema salsugineum (Saltwater cress) (Sisymbrium salsugineum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema.
OX NCBI_TaxID=72664 {ECO:0000313|EMBL:ESQ48026.1, ECO:0000313|Proteomes:UP000030689};
RN [1] {ECO:0000313|EMBL:ESQ48026.1, ECO:0000313|Proteomes:UP000030689}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23518688; DOI=10.3389/fpls.2013.00046;
RA Yang R., Jarvis D.E., Chen H., Beilstein M.A., Grimwood J., Jenkins J.,
RA Shu S., Prochnik S., Xin M., Ma C., Schmutz J., Wing R.A.,
RA Mitchell-Olds T., Schumaker K.S., Wang X.;
RT "The Reference Genome of the Halophytic Plant Eutrema salsugineum.";
RL Front. Plant Sci. 4:46-46(2013).
CC -!- SUBCELLULAR LOCATION: Chromosome {ECO:0000256|ARBA:ARBA00004286}.
CC -!- SIMILARITY: Belongs to the Tonsoku family.
CC {ECO:0000256|ARBA:ARBA00010999}.
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DR EMBL; KI517408; ESQ48026.1; -; Genomic_DNA.
DR RefSeq; XP_006406573.1; XM_006406510.1.
DR STRING; 72664.V4NNI5; -.
DR EnsemblPlants; ESQ48026; ESQ48026; EUTSA_v10019906mg.
DR GeneID; 18023743; -.
DR Gramene; ESQ48026; ESQ48026; EUTSA_v10019906mg.
DR KEGG; eus:EUTSA_v10019906mg; -.
DR eggNOG; KOG0619; Eukaryota.
DR eggNOG; KOG1124; Eukaryota.
DR OMA; VKPCCRK; -.
DR OrthoDB; 461772at2759; -.
DR Proteomes; UP000030689; Unassembled WGS sequence.
DR GO; GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.
DR GO; GO:0005634; C:nucleus; IEA:EnsemblPlants.
DR GO; GO:0042393; F:histone binding; IEA:EnsemblPlants.
DR GO; GO:0051301; P:cell division; IEA:EnsemblPlants.
DR GO; GO:0000724; P:double-strand break repair via homologous recombination; IEA:EnsemblPlants.
DR GO; GO:0040029; P:epigenetic regulation of gene expression; IEA:InterPro.
DR GO; GO:0000086; P:G2/M transition of mitotic cell cycle; IEA:EnsemblPlants.
DR GO; GO:0009933; P:meristem structural organization; IEA:EnsemblPlants.
DR GO; GO:0009934; P:regulation of meristem structural organization; IEA:EnsemblPlants.
DR GO; GO:0031297; P:replication fork processing; IEA:EnsemblPlants.
DR GO; GO:0072423; P:response to DNA damage checkpoint signaling; IEA:InterPro.
DR Gene3D; 3.80.10.10; Ribonuclease Inhibitor; 1.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR001611; Leu-rich_rpt.
DR InterPro; IPR032675; LRR_dom_sf.
DR InterPro; IPR044227; TONSOKU.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR019734; TPR_repeat.
DR PANTHER; PTHR47684; PROTEIN TONSOKU; 1.
DR PANTHER; PTHR47684:SF1; PROTEIN TONSOKU; 1.
DR Pfam; PF13516; LRR_6; 1.
DR Pfam; PF13176; TPR_7; 1.
DR SMART; SM00368; LRR_RI; 5.
DR SMART; SM00028; TPR; 6.
DR SUPFAM; SSF52047; RNI-like; 1.
DR SUPFAM; SSF48452; TPR-like; 3.
DR PROSITE; PS50005; TPR; 1.
PE 3: Inferred from homology;
KW Chromatin regulator {ECO:0000256|ARBA:ARBA00022853};
KW Chromosome {ECO:0000256|ARBA:ARBA00022454};
KW Coiled coil {ECO:0000256|SAM:Coils};
KW DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW Reference proteome {ECO:0000313|Proteomes:UP000030689};
KW TPR repeat {ECO:0000256|PROSITE-ProRule:PRU00339}.
FT REPEAT 66..99
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REGION 490..523
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 280..327
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 1326 AA; 148109 MW; 6D6CC4263A373623 CRC64;
MGRIDVAAAK RAYRTATEVG NRSEEARWAN NVGDILKNDG EYVEALKWFR IDYDISVKYL
PGKDLLPTCQ SLGEIYLRLQ DFEEALIYQK KHLELAEDNN DTVEKQRACT QLGRTYHEIF
LKSEDDCDAI QSAKKYFKKA MELAQVLKEK PPPGESSSFL EEYINAHNNI GMLDLDLDNP
DAACKILKKG LEICDEEEVK EYDAMRSRLH HNLGNVFLEL RKWDEAKEHI EMDINICHKI
NHCQGEAKGY INLAELHNRT QKYHDALSCY GKASALAKSM QDESALVEQI EENIKTVKKA
IKVMEELREE ELRLKKLSAE MTDAKGTSEE RKSMLLVHAC LERLIEKSSM VFAWGKHLEF
SKRKKKIAVE LCDKEKLSDA FLVVGESYQK LRDFRKSLKW YDRSYENYKA IGNLEGQALA
KINIGDGLDC IGEWTRALKE YENGYRIALR ANLPSIQLTA LEDMHYSHMI RFGNAKQARE
LKENIQNLKE SEHGEGAQFG TEDECSETDS EEHGDISNDR PNACSLPYLR TSNSLRPEPL
ADLDEANDDV PLISLLQPGK RLSKRKQFSG KQDVETDQAK KDFVALTDPQ TVAGRKRIRV
ILSDDESETE YELGCPKGSF HKITSQSEEF SDESMYYDGA VNCTDNPAIQ DHVEEGSCSY
TSLRPTKGAP NVNNCRPLIN TRAVESAGCG IKGSQCEAGE SNSTQCKNGA ALVNHAYSKT
EDQNIKIKIE NEHMALDSCS GNDESVKVEL TCLYYLQLPD NEKSKGLLPI IHHLEYGGKV
LKPLDLYEIL TGSSENVVIE ASVNGWVHKR VMKLYMDCCQ KLSEKPSIKL LKKLYISEVE
DDINVSECKL QDISAAPLLC ALHVHNTVAM LDLSHNMLGN GTMEKLKQLF ASSSQIYGAL
TLDLHCNRFG PTALFQICEC PVLFTRLEVL NVSRNRLTDA CGSYLSTILK NCRALYSLNV
EHCSLTSRTI QKIADALYPE SGLSQLYIGY NNPVSGSAIQ NLLAKLATLS SFAELSMNGI
KLSSQVVDSL SVLVKTPSLS KLLVGSSGIG TDGAIKITES LCYQKEETVR LDLSCCGLAS
PFFLRLIQDI TLTSSILELN VGGNPITEEG ISALGVLLTN PCSKIKVLTV SKCHLKLSGI
LCVIQALSEN KNLEELNISE NAKLDETVFG ELVKESSEMG QQEHGTCESI TAMDKTHRVE
SKNHCQNPEK EQELCETSME CDNLEVADSE DDQIEEQTAA SSSLSLPRKN HIIEELSTAL
AMANQLQILD LSNNGFSVEV LETLYMAWSS SGSRTGIAQR HVKDEIVHYY VEGKICCGVK
SCCRKD
//
