ID V5EF73_KALBG Unreviewed; 447 AA.
AC V5EF73;
DT 22-JAN-2014, integrated into UniProtKB/TrEMBL.
DT 22-JAN-2014, sequence version 1.
DT 24-JAN-2024, entry version 36.
DE RecName: Full=RNA-binding S4 domain-containing protein {ECO:0000259|SMART:SM00363};
GN ORFNames=PSEUBRA_SCAF12g01721 {ECO:0000313|EMBL:EST09126.1};
OS Kalmanozyma brasiliensis (strain GHG001) (Yeast) (Pseudozyma brasiliensis).
OC Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina;
OC Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Kalmanozyma.
OX NCBI_TaxID=1365824 {ECO:0000313|EMBL:EST09126.1, ECO:0000313|Proteomes:UP000019377};
RN [1] {ECO:0000313|Proteomes:UP000019377}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=GHG001 {ECO:0000313|Proteomes:UP000019377};
RX PubMed=24356824; DOI=10.1128/genomea.00920-13;
RA Oliveira J.V.D.C., dos Santos R.A.C., Borges T.A., Riano-Pachon D.M.,
RA Goldman G.H.;
RT "Draft genome sequence of Pseudozyma brasiliensis sp. nov. strain GHG001, a
RT high producer of endo-1,4-xylanase isolated from an insect pest of
RT sugarcane.";
RL Genome Announc. 1:E0092013-E0092013(2013).
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uS4 family.
CC {ECO:0000256|ARBA:ARBA00007465}.
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DR EMBL; KI545854; EST09126.1; -; Genomic_DNA.
DR RefSeq; XP_016294115.1; XM_016434377.1.
DR AlphaFoldDB; V5EF73; -.
DR STRING; 1365824.V5EF73; -.
DR GeneID; 27416981; -.
DR eggNOG; ENOG502QTS9; Eukaryota.
DR HOGENOM; CLU_041823_0_0_1; -.
DR OMA; GDMFQVE; -.
DR OrthoDB; 1347927at2759; -.
DR Proteomes; UP000019377; Unassembled WGS sequence.
DR GO; GO:0015935; C:small ribosomal subunit; IEA:InterPro.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR CDD; cd00165; S4; 1.
DR Gene3D; 3.10.290.10; RNA-binding S4 domain; 1.
DR InterPro; IPR022801; Ribosomal_uS4.
DR InterPro; IPR018079; Ribosomal_uS4_CS.
DR InterPro; IPR002942; S4_RNA-bd.
DR InterPro; IPR036986; S4_RNA-bd_sf.
DR PANTHER; PTHR11831; 30S 40S RIBOSOMAL PROTEIN; 1.
DR PANTHER; PTHR11831:SF4; 37S RIBOSOMAL PROTEIN NAM9, MITOCHONDRIAL; 1.
DR Pfam; PF01479; S4; 1.
DR SMART; SM00363; S4; 1.
DR SUPFAM; SSF55174; Alpha-L RNA-binding motif; 1.
DR PROSITE; PS00632; RIBOSOMAL_S4; 1.
DR PROSITE; PS50889; S4; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000019377};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274};
KW Ribosomal protein {ECO:0000256|ARBA:ARBA00022980};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00182};
KW rRNA-binding {ECO:0000256|ARBA:ARBA00022730, ECO:0000256|PROSITE-
KW ProRule:PRU00182}.
FT DOMAIN 154..221
FT /note="RNA-binding S4"
FT /evidence="ECO:0000259|SMART:SM00363"
FT REGION 227..292
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 250..282
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 447 AA; 49584 MW; 39AAAB69BA04483E CRC64;
MRKAKVFSHE TIMPRMSWSP RNLYNLLARS TVPFHSSQTT FTKTSLTMYQ QRWRSKRFLR
AYHGDWIPEK RFKRWFLPTD LPSFVPPQVS ASSSASSAGP RRGGLFDKAL QARRSDGAPF
TEEKEGYANV TQQKVVEEMD AMPTASLFMR DVERRLDVVV FRSCFARSAY ESRSMVVQGK
VKVNGVKCSN PNHLLQPGDL INVEPAAVPM LSKELAKKAS AQKVNDAVTG EADATEAAEA
ADAEAAESNE GGSSEATTTE ATASSSEAAS SDKPAESSPS TSSDRGKAKE TEKVLPPGVL
PFTLPDYAAP FLFIPPYLEV SFTTCSAIYV RHPTIVPSRT STDGKTRWTF RTDLPSPYPA
GGELYSMAWE HYTRNAPRTR ADARRVKLEA EAGRNGFDTM RAKDQNMKRS ALRRGWGRTK
PVEGWRRHLD AARAREASKW SAARVVA
//
