ID V5WEX1_9SPIO Unreviewed; 350 AA.
AC V5WEX1;
DT 19-FEB-2014, integrated into UniProtKB/TrEMBL.
DT 19-FEB-2014, sequence version 1.
DT 27-MAR-2024, entry version 48.
DE SubName: Full=Transcriptional repressor of arabinoside utilization operon, GntR family {ECO:0000313|EMBL:AHC14180.1};
GN ORFNames=L21SP2_0755 {ECO:0000313|EMBL:AHC14180.1};
OS Salinispira pacifica.
OC Bacteria; Spirochaetota; Spirochaetia; Spirochaetales; Spirochaetaceae;
OC Salinispira.
OX NCBI_TaxID=1307761 {ECO:0000313|EMBL:AHC14180.1, ECO:0000313|Proteomes:UP000018680};
RN [1] {ECO:0000313|EMBL:AHC14180.1, ECO:0000313|Proteomes:UP000018680}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=L21-RPul-D2 {ECO:0000313|EMBL:AHC14180.1,
RC ECO:0000313|Proteomes:UP000018680};
RX PubMed=26203324; DOI=10.1186/1944-3277-10-7;
RA Ben Hania W., Joseph M., Schumann P., Bunk B., Fiebig A., Sproer C.,
RA Klenk H.P., Fardeau M.L., Spring S.;
RT "Complete genome sequence and description of Salinispira pacifica gen.
RT nov., sp. nov., a novel spirochaete isolated form a hypersaline microbial
RT mat.";
RL Stand. Genomic Sci. 10:7-7(2015).
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DR EMBL; CP006939; AHC14180.1; -; Genomic_DNA.
DR RefSeq; WP_024267111.1; NC_023035.1.
DR AlphaFoldDB; V5WEX1; -.
DR STRING; 1307761.L21SP2_0755; -.
DR KEGG; slr:L21SP2_0755; -.
DR eggNOG; COG1609; Bacteria.
DR HOGENOM; CLU_037628_6_2_12; -.
DR OrthoDB; 9815017at2; -.
DR Proteomes; UP000018680; Chromosome.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR CDD; cd01541; PBP1_AraR; 1.
DR CDD; cd07377; WHTH_GntR; 1.
DR Gene3D; 3.40.50.2300; -; 2.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR033532; AraR_ligand_bind_dom.
DR InterPro; IPR046335; LacI/GalR-like_sensor.
DR InterPro; IPR028082; Peripla_BP_I.
DR InterPro; IPR000524; Tscrpt_reg_HTH_GntR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30146:SF147; ARABINOSE METABOLISM TRANSCRIPTIONAL REPRESSOR; 1.
DR PANTHER; PTHR30146; LACI-RELATED TRANSCRIPTIONAL REPRESSOR; 1.
DR Pfam; PF00392; GntR; 1.
DR Pfam; PF13377; Peripla_BP_3; 1.
DR PRINTS; PR00035; HTHGNTR.
DR SMART; SM00345; HTH_GNTR; 1.
DR SUPFAM; SSF53822; Periplasmic binding protein-like I; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50949; HTH_GNTR; 1.
PE 4: Predicted;
KW Cell membrane {ECO:0000256|ARBA:ARBA00022475};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Membrane {ECO:0000256|ARBA:ARBA00022475};
KW Reference proteome {ECO:0000313|Proteomes:UP000018680};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 8..76
FT /note="HTH gntR-type"
FT /evidence="ECO:0000259|PROSITE:PS50949"
SQ SEQUENCE 350 AA; 39470 MW; 4FDFB67EF5D50D66 CRC64;
MEDQSKQLPK YIQVKKRLLS YIQEEQLQPG DLIPSENKLV KLFHVSRNTV RQAIDELVNL
NVLATRQGKG TYFKGFKNSG KVRSGLIGVI NHTVLDGIYP AIIHGIEDVL HSREYTMVLS
NSAHNTDREV ASLKRMIEIS IDGLIIEPTF SALMQPSDTT SLLLQSLDVP VIFTHFSAPF
FSNSSIEVDE FQSGYLSAQY LIQKGHKDIA IIIKTDTLSL CHRLEGFLKA LSDHNMQERP
EFIKTFVEKD EKEIPGAHFS EELLALGKGR PTAIFYYNDE VALQGFRYLK SRNISIPDEM
SILGFDNIDD IKGLTPGLTT FEHPKYSLGR WAAEMLFEEL DSEAPSSSVM
//
