ID V6J012_9BACL Unreviewed; 646 AA.
AC V6J012;
DT 19-FEB-2014, integrated into UniProtKB/TrEMBL.
DT 19-FEB-2014, sequence version 1.
DT 24-JAN-2024, entry version 25.
DE SubName: Full=Stage V sporulation protein D {ECO:0000313|EMBL:EST13147.1};
GN ORFNames=P343_03400 {ECO:0000313|EMBL:EST13147.1};
OS Sporolactobacillus laevolacticus DSM 442.
OC Bacteria; Bacillota; Bacilli; Bacillales; Sporolactobacillaceae;
OC Sporolactobacillus.
OX NCBI_TaxID=1395513 {ECO:0000313|EMBL:EST13147.1, ECO:0000313|Proteomes:UP000018296};
RN [1] {ECO:0000313|EMBL:EST13147.1, ECO:0000313|Proteomes:UP000018296}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 442 {ECO:0000313|EMBL:EST13147.1,
RC ECO:0000313|Proteomes:UP000018296};
RX PubMed=24371202;
RA Wang H., Wang L., Ju J., Yu B., Ma Y.;
RT "Genome Sequence of Sporolactobacillus laevolacticus DSM442, an Efficient
RT Polymer-Grade D-Lactate Producer from Agricultural Waste Cottonseed as a
RT Nitrogen Source.";
RL Genome Announc. 1:e01100-13(2013).
CC -!- SIMILARITY: Belongs to the transpeptidase family.
CC {ECO:0000256|ARBA:ARBA00007171}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EST13147.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AWTC01000002; EST13147.1; -; Genomic_DNA.
DR RefSeq; WP_023508988.1; NZ_AWTC01000002.1.
DR AlphaFoldDB; V6J012; -.
DR STRING; 1395513.P343_03400; -.
DR PATRIC; fig|1395513.3.peg.689; -.
DR eggNOG; COG0768; Bacteria.
DR OrthoDB; 9804124at2; -.
DR Proteomes; UP000018296; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0008658; F:penicillin binding; IEA:InterPro.
DR CDD; cd06573; PASTA; 1.
DR Gene3D; 3.30.10.20; -; 1.
DR Gene3D; 3.30.450.330; -; 1.
DR Gene3D; 3.40.710.10; DD-peptidase/beta-lactamase superfamily; 1.
DR Gene3D; 3.90.1310.10; Penicillin-binding protein 2a (Domain 2); 1.
DR InterPro; IPR012338; Beta-lactam/transpept-like.
DR InterPro; IPR005543; PASTA_dom.
DR InterPro; IPR005311; PBP_dimer.
DR InterPro; IPR036138; PBP_dimer_sf.
DR InterPro; IPR001460; PCN-bd_Tpept.
DR InterPro; IPR011927; SpoVD_pbp.
DR NCBIfam; TIGR02214; spoVD_pbp; 1.
DR PANTHER; PTHR30627; PEPTIDOGLYCAN D,D-TRANSPEPTIDASE; 1.
DR PANTHER; PTHR30627:SF19; STAGE V SPORULATION PROTEIN D; 1.
DR Pfam; PF03793; PASTA; 1.
DR Pfam; PF03717; PBP_dimer; 1.
DR Pfam; PF00905; Transpeptidase; 1.
DR SMART; SM00740; PASTA; 1.
DR SUPFAM; SSF56601; beta-lactamase/transpeptidase-like; 1.
DR SUPFAM; SSF56519; Penicillin binding protein dimerisation domain; 1.
DR SUPFAM; SSF54184; Penicillin-binding protein 2x (pbp-2x), c-terminal domain; 1.
DR PROSITE; PS51178; PASTA; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000018296};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 12..32
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 582..640
FT /note="PASTA"
FT /evidence="ECO:0000259|PROSITE:PS51178"
SQ SEQUENCE 646 AA; 70610 MW; D31A177DCFCBF4C5 CRC64;
MRVSNVTVKR RLLFFLSVGL CVFAVFIVRL AYVQLFENNQ LTKIALDLWS RRIPYEAERG
RILDSRGKVL ATNISSPSVL VVPRQVKNKN ETAAKLASVL NMSQKKAYEK ITKKESIVRI
TPEGRKISNE KASQVKALGL PGVFVAEDFK RDYPNGNYLA HVLGFAGIDN QGLTGLESYY
NEGLKGENGH VAFFSDVHGN RMSSLKDKYI PPTSGSSLQL TIDSRVQSII ERELNNTVAK
YHPDSAMAIA MDPNSGAILG MSSKPDFNPE NYKKVPPEIY NHNLPIWKMY EPGSTFKVIT
LAAALQEKAV NLKNDHFFDS GAIDVAGSNL HCWKRGGHGD ETFLQVVQNS CNPGFVALGE
RVGKDKLFSY IHKFGFGEKT GIDLQGEAKG ILFNKDKIGP LEAATTAFGQ GVSVTPIQQI
AAVSAAVNGG YLYQPQLAKA WIDTDTGKTI NRVEPVMKRR VISEQTSKEV RNALESVVAQ
GTGRNAYVQG YRIGGKTGTA QKVDPKTGRY MSNNYIVSFM GFAPANNPKI VVYVAVDNPK
GTVQFGGTVS APIAGRIIGD SLSAMGVKKQ TGGLEKELRW PDQPLVKVPN LKGMGKDDLR
NALFDLKLKP EGSGNVVTMQ SPKPGIKVKQ GSTIMIYLGD KKKTDD
//
