ID V6S2L4_9FLAO Unreviewed; 167 AA.
AC V6S2L4;
DT 19-FEB-2014, integrated into UniProtKB/TrEMBL.
DT 19-FEB-2014, sequence version 1.
DT 27-MAR-2024, entry version 33.
DE RecName: Full=HTH-type transcriptional regulator {ECO:0000256|PIRNR:PIRNR006707};
GN ORFNames=IP98_01823 {ECO:0000313|EMBL:TWI12247.1};
OS Flavobacterium cauense R2A-7.
OC Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC Flavobacteriaceae; Flavobacterium.
OX NCBI_TaxID=1341154 {ECO:0000313|EMBL:TWI12247.1, ECO:0000313|Proteomes:UP000319848};
RN [1] {ECO:0000313|EMBL:TWI12247.1, ECO:0000313|Proteomes:UP000319848}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CGMCC 1.7270 {ECO:0000313|EMBL:TWI12247.1,
RC ECO:0000313|Proteomes:UP000319848};
RX PubMed=26203337; DOI=.1186/s40793-015-0017-x;
RA Whitman W.B., Woyke T., Klenk H.P., Zhou Y., Lilburn T.G., Beck B.J.,
RA De Vos P., Vandamme P., Eisen J.A., Garrity G., Hugenholtz P.,
RA Kyrpides N.C.;
RT "Genomic Encyclopedia of Bacterial and Archaeal Type Strains, Phase III:
RT the genomes of soil and plant-associated and newly described type
RT strains.";
RL Stand. Genomic Sci. 10:26-26(2015).
CC -!- SIMILARITY: Belongs to the GbsR family.
CC {ECO:0000256|PIRNR:PIRNR006707}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:TWI12247.1}.
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DR EMBL; VLKQ01000007; TWI12247.1; -; Genomic_DNA.
DR RefSeq; WP_023570373.1; NZ_VLKQ01000007.1.
DR AlphaFoldDB; V6S2L4; -.
DR STRING; 1341154.FCR2A7T_12230; -.
DR OrthoDB; 9792628at2; -.
DR Proteomes; UP000319848; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR CDD; cd00090; HTH_ARSR; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR011991; ArsR-like_HTH.
DR InterPro; IPR000835; HTH_MarR-typ.
DR InterPro; IPR026282; MJ1563.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR38465; HTH-TYPE TRANSCRIPTIONAL REGULATOR MJ1563-RELATED; 1.
DR PANTHER; PTHR38465:SF1; HTH-TYPE TRANSCRIPTIONAL REGULATOR MJ1563-RELATED; 1.
DR Pfam; PF12802; MarR_2; 1.
DR PIRSF; PIRSF006707; MJ1563; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|PIRNR:PIRNR006707};
KW Transcription {ECO:0000256|ARBA:ARBA00023163,
KW ECO:0000256|PIRNR:PIRNR006707};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015,
KW ECO:0000256|PIRNR:PIRNR006707}.
FT DOMAIN 27..80
FT /note="HTH marR-type"
FT /evidence="ECO:0000259|Pfam:PF12802"
SQ SEQUENCE 167 AA; 19336 MW; C1565078B0F6D876 CRC64;
MEFKEAKNKF VQTWGALGSQ WGINKTMAQI HALLMVSSEP VSMEDIMEEL QISRGNASMN
LRALMDWGIV YKEYKAGERR EFFTAEKDLD ELAVKISRER SKREIKPALK VLKEVSSIEA
NATAEEKHFV EQTTKLYDFV LKADNVLDKI TEYKDNWLTK LVIKIMK
//
