ID V7AE59_PHAVU Unreviewed; 556 AA.
AC V7AE59;
DT 19-FEB-2014, integrated into UniProtKB/TrEMBL.
DT 19-FEB-2014, sequence version 1.
DT 27-MAR-2024, entry version 36.
DE RecName: Full=Nop domain-containing protein {ECO:0000259|PROSITE:PS51358};
GN ORFNames=PHAVU_011G042200g {ECO:0000313|EMBL:ESW03789.1};
OS Phaseolus vulgaris (Kidney bean) (French bean).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Phaseolus.
OX NCBI_TaxID=3885 {ECO:0000313|EMBL:ESW03789.1, ECO:0000313|Proteomes:UP000000226};
RN [1] {ECO:0000313|Proteomes:UP000000226}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. G19833 {ECO:0000313|Proteomes:UP000000226};
RX PubMed=24908249; DOI=10.1038/ng.3008;
RA Schmutz J., McClean P.E., Mamidi S., Wu G.A., Cannon S.B., Grimwood J.,
RA Jenkins J., Shu S., Song Q., Chavarro C., Torres-Torres M., Geffroy V.,
RA Moghaddam S.M., Gao D., Abernathy B., Barry K., Blair M., Brick M.A.,
RA Chovatia M., Gepts P., Goodstein D.M., Gonzales M., Hellsten U.,
RA Hyten D.L., Jia G., Kelly J.D., Kudrna D., Lee R., Richard M.M.,
RA Miklas P.N., Osorno J.M., Rodrigues J., Thareau V., Urrea C.A., Wang M.,
RA Yu Y., Zhang M., Wing R.A., Cregan P.B., Rokhsar D.S., Jackson S.A.;
RT "A reference genome for common bean and genome-wide analysis of dual
RT domestications.";
RL Nat. Genet. 46:707-713(2014).
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus
CC {ECO:0000256|ARBA:ARBA00004604}.
CC -!- SIMILARITY: Belongs to the NOP5/NOP56 family.
CC {ECO:0000256|ARBA:ARBA00009211}.
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DR EMBL; CM002298; ESW03789.1; -; Genomic_DNA.
DR RefSeq; XP_007131795.1; XM_007131733.1.
DR AlphaFoldDB; V7AE59; -.
DR STRING; 3885.V7AE59; -.
DR EnsemblPlants; ESW03789; ESW03789; PHAVU_011G042200g.
DR GeneID; 18615124; -.
DR Gramene; ESW03789; ESW03789; PHAVU_011G042200g.
DR KEGG; pvu:PHAVU_011G042200g; -.
DR eggNOG; KOG2572; Eukaryota.
DR OMA; EPPQMEK; -.
DR OrthoDB; 5489581at2759; -.
DR Proteomes; UP000000226; Chromosome 11.
DR GO; GO:0031428; C:box C/D RNP complex; IEA:InterPro.
DR GO; GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
DR GO; GO:0032040; C:small-subunit processome; IEA:InterPro.
DR GO; GO:0030515; F:snoRNA binding; IEA:InterPro.
DR GO; GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
DR Gene3D; 1.10.287.4070; -; 1.
DR Gene3D; 1.10.246.90; Nop domain; 1.
DR InterPro; IPR045056; Nop56/Nop58.
DR InterPro; IPR012974; NOP58/56_N.
DR InterPro; IPR042239; Nop_C.
DR InterPro; IPR002687; Nop_dom.
DR InterPro; IPR036070; Nop_dom_sf.
DR InterPro; IPR012976; NOSIC.
DR PANTHER; PTHR10894; NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58; 1.
DR PANTHER; PTHR10894:SF1; NUCLEOLAR PROTEIN 58; 1.
DR Pfam; PF01798; Nop; 1.
DR Pfam; PF08156; NOP5NT; 1.
DR SMART; SM00931; NOSIC; 1.
DR SUPFAM; SSF89124; Nop domain; 1.
DR PROSITE; PS51358; NOP; 1.
PE 3: Inferred from homology;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000000226}.
FT DOMAIN 280..398
FT /note="Nop"
FT /evidence="ECO:0000259|PROSITE:PS51358"
FT REGION 407..556
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 412..426
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 493..514
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 521..556
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 556 AA; 61432 MW; 27D1978E72E2A165 CRC64;
MLVLFETPAG FALFKVLDEG KLSKVEDLWT NFSSADTARQ VVKLKAFSKF ENTSEALEAA
TLLIDGKASK GLRKFLRVHC ENETLGVADS KLGNVIKEKL KIDCVHNNAV MELMRGVRNQ
LTELISGLAV QDMAPMSLGL SHSLSRYKLK FSAEKVDTMI VQAIGLLDDL DKELNTYAMR
VREWYGWHFP ELTKIIQDNI QYARAVKLMG DRVNAAVLDF SEILSEEVEA EVKEASVISM
GTEIGELDLA NIRELCDQVL SLSEYRAQLY DYLKSRMNTI APNLTAMVGE LVGARLIAHG
GSLLNLAKQP GSTVQILGAE KALFRALKTK HATPKYGLIY HASLIGQAAA KFKGKISRSL
AAKTALAIRC DALGDGQDNT MGLENRAKLE ARLRNLEGKE LGRFAGSAKG KPKIEAYDKD
RKKGPGGLIT PAKTYNPSAD SVIGQINSAM DEDVQEPPSV ADKKKEKKEK KKKKGKNEED
STVKAEEDVV EEAEPEVVKK EKKKKRKEAS ESAELQNGND ELNGGEKKKK RKKHAEQEES
PEMPIKKKGK KKKSED
//
