ID V7AF67_PHAVU Unreviewed; 363 AA.
AC V7AF67;
DT 19-FEB-2014, integrated into UniProtKB/TrEMBL.
DT 19-FEB-2014, sequence version 1.
DT 27-MAR-2024, entry version 49.
DE RecName: Full=C3H1-type domain-containing protein {ECO:0000259|PROSITE:PS50103};
GN ORFNames=PHAVU_011G018600g {ECO:0000313|EMBL:ESW03498.1};
OS Phaseolus vulgaris (Kidney bean) (French bean).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Phaseolus.
OX NCBI_TaxID=3885 {ECO:0000313|EMBL:ESW03498.1, ECO:0000313|Proteomes:UP000000226};
RN [1] {ECO:0000313|Proteomes:UP000000226}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. G19833 {ECO:0000313|Proteomes:UP000000226};
RX PubMed=24908249; DOI=10.1038/ng.3008;
RA Schmutz J., McClean P.E., Mamidi S., Wu G.A., Cannon S.B., Grimwood J.,
RA Jenkins J., Shu S., Song Q., Chavarro C., Torres-Torres M., Geffroy V.,
RA Moghaddam S.M., Gao D., Abernathy B., Barry K., Blair M., Brick M.A.,
RA Chovatia M., Gepts P., Goodstein D.M., Gonzales M., Hellsten U.,
RA Hyten D.L., Jia G., Kelly J.D., Kudrna D., Lee R., Richard M.M.,
RA Miklas P.N., Osorno J.M., Rodrigues J., Thareau V., Urrea C.A., Wang M.,
RA Yu Y., Zhang M., Wing R.A., Cregan P.B., Rokhsar D.S., Jackson S.A.;
RT "A reference genome for common bean and genome-wide analysis of dual
RT domestications.";
RL Nat. Genet. 46:707-713(2014).
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DR EMBL; CM002298; ESW03498.1; -; Genomic_DNA.
DR RefSeq; XP_007131504.1; XM_007131442.1.
DR AlphaFoldDB; V7AF67; -.
DR STRING; 3885.V7AF67; -.
DR EnsemblPlants; ESW03498; ESW03498; PHAVU_011G018600g.
DR GeneID; 18614881; -.
DR Gramene; ESW03498; ESW03498; PHAVU_011G018600g.
DR KEGG; pvu:PHAVU_011G018600g; -.
DR eggNOG; ENOG502QVMW; Eukaryota.
DR OMA; AYDDAKH; -.
DR OrthoDB; 325230at2759; -.
DR PhylomeDB; V7AF67; -.
DR Proteomes; UP000000226; Chromosome 11.
DR GO; GO:0005635; C:nuclear envelope; IEA:EnsemblPlants.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0061630; F:ubiquitin protein ligase activity; IEA:InterPro.
DR GO; GO:0000209; P:protein polyubiquitination; IEA:InterPro.
DR Gene3D; 3.30.1370.210; -; 1.
DR InterPro; IPR045072; MKRN-like.
DR InterPro; IPR041367; Znf-CCCH_4.
DR InterPro; IPR000571; Znf_CCCH.
DR InterPro; IPR036855; Znf_CCCH_sf.
DR PANTHER; PTHR11224; MAKORIN-RELATED; 1.
DR PANTHER; PTHR11224:SF44; ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 16; 1.
DR Pfam; PF18044; zf-CCCH_4; 1.
DR SMART; SM00356; ZnF_C3H1; 1.
DR SUPFAM; SSF90229; CCCH zinc finger; 1.
DR PROSITE; PS50103; ZF_C3H1; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723, ECO:0000256|PROSITE-
KW ProRule:PRU00723}; Reference proteome {ECO:0000313|Proteomes:UP000000226};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Zinc {ECO:0000256|ARBA:ARBA00022833, ECO:0000256|PROSITE-ProRule:PRU00723};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00723}.
FT DOMAIN 4..26
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT ZN_FING 4..26
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT REGION 24..125
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 208..244
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 26..83
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 94..116
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 363 AA; 40096 MW; ED2B09CC41E6A1EA CRC64;
MRDICRNFQR GSCQYGERCR YSHVTQQRKP NDQGFGGQNG SHQQRSTNPF GFGSGSGSQQ
QQQKSKPFGF GAQNSSQLNG GPRPEYKPNQ YKPFENKWNR QPSKPQNGVK SDNNPQPVEH
RCTDPDNCKR QIAEDFEKEK PIWILTCYSH CKGAPCDIVG DISYEELRAS AYEDAKRGMS
LQSIVEKERN ILKSKMLEFE KLLSEPYQKP VSSSLDSQRP QSIGANANQF SGTSQSNGPL
SVSSFSQLGS SMNMGFGRPS APPTNTLAQP SFFGVGVTSG NFGVQSNPHS TQVDLTMFPG
STQPTSTTFN NSGPNTMFQT TSDVQLSNKL QAENVSGDIS IWLKDKWNPG EIPEEAPPDS
LVR
//
