ID V7APC8_PHAVU Unreviewed; 289 AA.
AC V7APC8;
DT 19-FEB-2014, integrated into UniProtKB/TrEMBL.
DT 19-FEB-2014, sequence version 1.
DT 24-JAN-2024, entry version 47.
DE RecName: Full=MYB transcription factor {ECO:0000256|ARBA:ARBA00032813};
GN ORFNames=PHAVU_010G136100g {ECO:0000313|EMBL:ESW07512.1};
OS Phaseolus vulgaris (Kidney bean) (French bean).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Phaseolus.
OX NCBI_TaxID=3885 {ECO:0000313|EMBL:ESW07512.1, ECO:0000313|Proteomes:UP000000226};
RN [1] {ECO:0000313|Proteomes:UP000000226}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. G19833 {ECO:0000313|Proteomes:UP000000226};
RX PubMed=24908249; DOI=10.1038/ng.3008;
RA Schmutz J., McClean P.E., Mamidi S., Wu G.A., Cannon S.B., Grimwood J.,
RA Jenkins J., Shu S., Song Q., Chavarro C., Torres-Torres M., Geffroy V.,
RA Moghaddam S.M., Gao D., Abernathy B., Barry K., Blair M., Brick M.A.,
RA Chovatia M., Gepts P., Goodstein D.M., Gonzales M., Hellsten U.,
RA Hyten D.L., Jia G., Kelly J.D., Kudrna D., Lee R., Richard M.M.,
RA Miklas P.N., Osorno J.M., Rodrigues J., Thareau V., Urrea C.A., Wang M.,
RA Yu Y., Zhang M., Wing R.A., Cregan P.B., Rokhsar D.S., Jackson S.A.;
RT "A reference genome for common bean and genome-wide analysis of dual
RT domestications.";
RL Nat. Genet. 46:707-713(2014).
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus
CC {ECO:0000256|ARBA:ARBA00004604}.
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DR EMBL; CM002297; ESW07512.1; -; Genomic_DNA.
DR RefSeq; XP_007135518.1; XM_007135456.1.
DR AlphaFoldDB; V7APC8; -.
DR STRING; 3885.V7APC8; -.
DR EnsemblPlants; ESW07512; ESW07512; PHAVU_010G136100g.
DR GeneID; 18618357; -.
DR Gramene; ESW07512; ESW07512; PHAVU_010G136100g.
DR KEGG; pvu:PHAVU_010G136100g; -.
DR eggNOG; ENOG502QTN3; Eukaryota.
DR OMA; KWKNIIR; -.
DR OrthoDB; 325267at2759; -.
DR Proteomes; UP000000226; Chromosome 10.
DR GO; GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
DR GO; GO:0000786; C:nucleosome; IEA:InterPro.
DR GO; GO:0003691; F:double-stranded telomeric DNA binding; IEA:InterPro.
DR GO; GO:0008757; F:S-adenosylmethionine-dependent methyltransferase activity; IEA:UniProt.
DR GO; GO:0006334; P:nucleosome assembly; IEA:InterPro.
DR CDD; cd00073; H15; 1.
DR CDD; cd11660; SANT_TRF; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR005818; Histone_H1/H5_H15.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR017930; Myb_dom.
DR InterPro; IPR001005; SANT/Myb.
DR InterPro; IPR044597; SMH1-6.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR46267; SINGLE MYB HISTONE 4; 1.
DR PANTHER; PTHR46267:SF3; TELOMERE REPEAT-BINDING FACTOR 4-RELATED; 1.
DR Pfam; PF00538; Linker_histone; 1.
DR Pfam; PF00249; Myb_DNA-binding; 1.
DR SMART; SM00526; H15; 1.
DR SMART; SM00717; SANT; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS51504; H15; 1.
DR PROSITE; PS51294; HTH_MYB; 1.
DR PROSITE; PS50090; MYB_LIKE; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054};
KW Reference proteome {ECO:0000313|Proteomes:UP000000226}.
FT DOMAIN 1..62
FT /note="HTH myb-type"
FT /evidence="ECO:0000259|PROSITE:PS51294"
FT DOMAIN 1..57
FT /note="Myb-like"
FT /evidence="ECO:0000259|PROSITE:PS50090"
FT DOMAIN 121..189
FT /note="H15"
FT /evidence="ECO:0000259|PROSITE:PS51504"
FT REGION 53..123
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 189..220
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 80..120
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 289 AA; 31765 MW; C85D08787A3C69A7 CRC64;
MGNQKQKWTQ DEEDALIAGV EKHGPGKWKN ILKDPQFAPF LTSRSNIDLK DKWRNLSVSN
GSQGSKDKPR IPKLKALPAP PSATTSSTTT ATSQNAAPVP QNRPSDVAVP DSSPNDQDVK
NPPRYNAMVF EALSALKDNN GSDLNAIVTF IEQKHQVPQN FRRALSTRLR RLVSQGKLEK
VQNCYKIKKD VSSGTKSPPP KPKDVRPLQL QPQRQPPTSV FTASNATVKE AADTAAYRVA
DAESKSYLAA EAIKEAEKIS LLVEHSDSML QLAKDIYEQC SRGEIILLA
//
