ID   V7ARS2_PHAVU            Unreviewed;       962 AA.
AC   V7ARS2;
DT   19-FEB-2014, integrated into UniProtKB/TrEMBL.
DT   19-FEB-2014, sequence version 1.
DT   27-MAR-2024, entry version 39.
DE   RecName: Full=JmjC domain-containing protein {ECO:0000259|PROSITE:PS51184};
GN   ORFNames=PHAVU_009G032400g {ECO:0000313|EMBL:ESW08264.1};
OS   Phaseolus vulgaris (Kidney bean) (French bean).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC   NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Phaseolus.
OX   NCBI_TaxID=3885 {ECO:0000313|EMBL:ESW08264.1, ECO:0000313|Proteomes:UP000000226};
RN   [1] {ECO:0000313|Proteomes:UP000000226}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. G19833 {ECO:0000313|Proteomes:UP000000226};
RX   PubMed=24908249; DOI=10.1038/ng.3008;
RA   Schmutz J., McClean P.E., Mamidi S., Wu G.A., Cannon S.B., Grimwood J.,
RA   Jenkins J., Shu S., Song Q., Chavarro C., Torres-Torres M., Geffroy V.,
RA   Moghaddam S.M., Gao D., Abernathy B., Barry K., Blair M., Brick M.A.,
RA   Chovatia M., Gepts P., Goodstein D.M., Gonzales M., Hellsten U.,
RA   Hyten D.L., Jia G., Kelly J.D., Kudrna D., Lee R., Richard M.M.,
RA   Miklas P.N., Osorno J.M., Rodrigues J., Thareau V., Urrea C.A., Wang M.,
RA   Yu Y., Zhang M., Wing R.A., Cregan P.B., Rokhsar D.S., Jackson S.A.;
RT   "A reference genome for common bean and genome-wide analysis of dual
RT   domestications.";
RL   Nat. Genet. 46:707-713(2014).
CC   -!- COFACTOR:
CC       Name=Fe(2+); Xref=ChEBI:CHEBI:29033;
CC         Evidence={ECO:0000256|ARBA:ARBA00001954};
CC   -!- SIMILARITY: Belongs to the JARID1 histone demethylase family.
CC       {ECO:0000256|ARBA:ARBA00006801}.
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DR   EMBL; CM002296; ESW08264.1; -; Genomic_DNA.
DR   RefSeq; XP_007136270.1; XM_007136208.1.
DR   AlphaFoldDB; V7ARS2; -.
DR   STRING; 3885.V7ARS2; -.
DR   EnsemblPlants; ESW08264; ESW08264; PHAVU_009G032400g.
DR   GeneID; 18619000; -.
DR   Gramene; ESW08264; ESW08264; PHAVU_009G032400g.
DR   KEGG; pvu:PHAVU_009G032400g; -.
DR   eggNOG; KOG2130; Eukaryota.
DR   OMA; QMRNIHQ; -.
DR   OrthoDB; 6094at2759; -.
DR   PhylomeDB; V7ARS2; -.
DR   Proteomes; UP000000226; Chromosome 9.
DR   GO; GO:0016491; F:oxidoreductase activity; IEA:UniProtKB-KW.
DR   Gene3D; 1.20.1280.50; -; 1.
DR   Gene3D; 2.60.120.650; Cupin; 1.
DR   InterPro; IPR041667; Cupin_8.
DR   InterPro; IPR036047; F-box-like_dom_sf.
DR   InterPro; IPR001810; F-box_dom.
DR   InterPro; IPR003347; JmjC_dom.
DR   InterPro; IPR011009; Kinase-like_dom_sf.
DR   PANTHER; PTHR12480; ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD; 1.
DR   PANTHER; PTHR12480:SF35; JMJC DOMAIN-CONTAINING PROTEIN 8; 1.
DR   Pfam; PF13621; Cupin_8; 1.
DR   Pfam; PF12937; F-box-like; 1.
DR   SMART; SM00558; JmjC; 1.
DR   SUPFAM; SSF51197; Clavaminate synthase-like; 1.
DR   SUPFAM; SSF81383; F-box domain; 1.
DR   SUPFAM; SSF56112; Protein kinase-like (PK-like); 1.
DR   PROSITE; PS51184; JMJC; 1.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000000226}.
FT   DOMAIN          215..378
FT                   /note="JmjC"
FT                   /evidence="ECO:0000259|PROSITE:PS51184"
SQ   SEQUENCE   962 AA;  109808 MW;  A8EEBEAD4C71AFC2 CRC64;
     MESQRDRRTE ALGDLRVLSD EILCAILERF TPRDVARVAC VSSVMYTLCN EEPLWMSLCL
     KGTSGSLQYK GSWKKTVLHN LNLPDKYKEY HRGPLYFDGF NSLFLYRRLY RCHTTLGAFH
     ADTGNVQRIK DISLKEFYNE YDAKKPVMLS GLADTWPARH KWTTDQLLLN YGDVAFKISQ
     RGARKVSMKF KDYVSYMKVQ HDEDPLYIFD EKFGETAPSL LKDYCVPHLF EEDFFDILDT
     DKRPSYRWFI IGPERSGASW HVDPALTSAW NTLLCGRKRW ALYPPGKVPL GVTVHVNEED
     GDVNVETPSS LQWWLDFYPL LAEEDKPIEC TQLPGETIYV PSGWWHCVLN LETTIAVTQN
     FVNSNNFEFV CLDMAPGYHH KGVCRVGLLA LDEDGYENVR QNMPCNEKNS SYNDLLRKEK
     RAKIQKDADG LNDERAINGV SRSYNLWKDG FSYDINFLSM FLDKDRDHYS ALWSSGNSIG
     QRELREWLSK LWIQKPKLRE LIWKGACIAL NANKWLECLS KICVFHNLPP PTDDERLPVG
     TGSNPVYLVG NSVVKIFVEG GLEASLYGLG TELEFQSRLR EANSPLSKHI PDVLASGIIY
     LENGSCTNLS WDGKGVPDVI VKSNIISRKC SVDDFSFGVW GRKQLEYRNA GIPVDGSGSL
     AGNSNIWPYV ITKRCEGNIF AELRDKLTWE DTTNLASFLG EQLNYLHLLS YPPPNISSFS
     DIDHELSLVG ANGCIATVNS KSNVTAEWWL FTRTLTKMRK DLSSRLTKWG DPIPCKLIEK
     IDEYIPPDFA ENFGNYACKH CSWIHTDVMD DNICMKPSMV CSTTAGNNED ITIVDNGLLS
     NYEVKSWCPS HILDFSDLSI GDPLVDLIPI YLDVFRGDSR LLKKFLESYK LPFVSEVSRW
     ESTEGDQKFG RLSYLAMCYC ILHHDNVLGA LFSLWEELRS AKSWEEVELA VWGELNNYKG
     FP
//