ID V7B442_PHAVU Unreviewed; 509 AA.
AC V7B442;
DT 19-FEB-2014, integrated into UniProtKB/TrEMBL.
DT 19-FEB-2014, sequence version 1.
DT 27-MAR-2024, entry version 35.
DE RecName: Full=LIMR family protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=PHAVU_008G104400g {ECO:0000313|EMBL:ESW12340.1};
OS Phaseolus vulgaris (Kidney bean) (French bean).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Phaseolus.
OX NCBI_TaxID=3885 {ECO:0000313|EMBL:ESW12340.1, ECO:0000313|Proteomes:UP000000226};
RN [1] {ECO:0000313|Proteomes:UP000000226}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. G19833 {ECO:0000313|Proteomes:UP000000226};
RX PubMed=24908249; DOI=10.1038/ng.3008;
RA Schmutz J., McClean P.E., Mamidi S., Wu G.A., Cannon S.B., Grimwood J.,
RA Jenkins J., Shu S., Song Q., Chavarro C., Torres-Torres M., Geffroy V.,
RA Moghaddam S.M., Gao D., Abernathy B., Barry K., Blair M., Brick M.A.,
RA Chovatia M., Gepts P., Goodstein D.M., Gonzales M., Hellsten U.,
RA Hyten D.L., Jia G., Kelly J.D., Kudrna D., Lee R., Richard M.M.,
RA Miklas P.N., Osorno J.M., Rodrigues J., Thareau V., Urrea C.A., Wang M.,
RA Yu Y., Zhang M., Wing R.A., Cregan P.B., Rokhsar D.S., Jackson S.A.;
RT "A reference genome for common bean and genome-wide analysis of dual
RT domestications.";
RL Nat. Genet. 46:707-713(2014).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
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DR EMBL; CM002295; ESW12340.1; -; Genomic_DNA.
DR RefSeq; XP_007140346.1; XM_007140284.1.
DR AlphaFoldDB; V7B442; -.
DR STRING; 3885.V7B442; -.
DR EnsemblPlants; ESW12340; ESW12340; PHAVU_008G104400g.
DR GeneID; 18622457; -.
DR Gramene; ESW12340; ESW12340; PHAVU_008G104400g.
DR KEGG; pvu:PHAVU_008G104400g; -.
DR eggNOG; ENOG502QPKQ; Eukaryota.
DR OMA; LMWEIVL; -.
DR OrthoDB; 5471657at2759; -.
DR Proteomes; UP000000226; Chromosome 8.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR InterPro; IPR006876; LMBR1-like_membr_prot.
DR PANTHER; PTHR31652; LIMR FAMILY PROTEIN DDB_G0283707-RELATED; 1.
DR PANTHER; PTHR31652:SF0; LIMR FAMILY PROTEIN DDB_G0283707-RELATED; 1.
DR Pfam; PF04791; LMBR1; 2.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000000226};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}.
FT TRANSMEM 6..28
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 40..60
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 90..111
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 127..148
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 207..240
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 332..355
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 375..402
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 422..447
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 475..494
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT COILED 256..310
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 509 AA; 56653 MW; 0C3C117CA30E0E6C CRC64;
MGDFNLALVI VAVVVCVIVF LVNVYLLVNY QHPDDANQAY FPKFVVVLGL SVAAISILML
PADVANRQAC RHAIYNGACN LTLPMKELWL AVYILDAVLV FFVIPFAMFY YEGDLDKTVG
KRVKSALLWM VTTAIVCALV LGILYGLVGK VDFTVRHLSS STTAFPNTWT FNSNEQCIGS
GVHQCSAYSA SPSSEKTWTI RSTFPEYVVA LATIVGSVLF AIFGGVGIAC LPLGLIFSFL
RRPKAVITRS QYIKEATELG KKARELKKAA EALHQEEKGG SKGRKFRKNV KEVEKELFQL
EEDVKLLEEM YPQGEKAETT WALTVLSYLA KIVFGILGLI VSVVWIIHII IYLLIDPPLS
PFLNQVFIKL DDIWGLFGTA AFAFFCFYLL LAVIAGAMML GLRLVFITIH PMKWGATLMN
SFLFNVGLIL LSSISVIQFC STAFAYYAQA TAAQEIFGHT LESLRGIKYL YKYNVFQIAF
VILAGLTFVY YAAFGWRRKK PSGRFQLST
//
