ID V7B8H4_PHAVU Unreviewed; 280 AA.
AC V7B8H4;
DT 19-FEB-2014, integrated into UniProtKB/TrEMBL.
DT 19-FEB-2014, sequence version 1.
DT 27-MAR-2024, entry version 37.
DE RecName: Full=Small nuclear ribonucleoprotein-associated protein {ECO:0000256|PIRNR:PIRNR037187};
GN ORFNames=PHAVU_008G234900g {ECO:0000313|EMBL:ESW13890.1};
OS Phaseolus vulgaris (Kidney bean) (French bean).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Phaseolus.
OX NCBI_TaxID=3885 {ECO:0000313|EMBL:ESW13890.1, ECO:0000313|Proteomes:UP000000226};
RN [1] {ECO:0000313|Proteomes:UP000000226}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. G19833 {ECO:0000313|Proteomes:UP000000226};
RX PubMed=24908249; DOI=10.1038/ng.3008;
RA Schmutz J., McClean P.E., Mamidi S., Wu G.A., Cannon S.B., Grimwood J.,
RA Jenkins J., Shu S., Song Q., Chavarro C., Torres-Torres M., Geffroy V.,
RA Moghaddam S.M., Gao D., Abernathy B., Barry K., Blair M., Brick M.A.,
RA Chovatia M., Gepts P., Goodstein D.M., Gonzales M., Hellsten U.,
RA Hyten D.L., Jia G., Kelly J.D., Kudrna D., Lee R., Richard M.M.,
RA Miklas P.N., Osorno J.M., Rodrigues J., Thareau V., Urrea C.A., Wang M.,
RA Yu Y., Zhang M., Wing R.A., Cregan P.B., Rokhsar D.S., Jackson S.A.;
RT "A reference genome for common bean and genome-wide analysis of dual
RT domestications.";
RL Nat. Genet. 46:707-713(2014).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|PIRNR:PIRNR037187}.
CC -!- SIMILARITY: Belongs to the snRNP SmB/SmN family.
CC {ECO:0000256|ARBA:ARBA00009123, ECO:0000256|PIRNR:PIRNR037187}.
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DR EMBL; CM002295; ESW13890.1; -; Genomic_DNA.
DR RefSeq; XP_007141896.1; XM_007141834.1.
DR AlphaFoldDB; V7B8H4; -.
DR STRING; 3885.V7B8H4; -.
DR EnsemblPlants; ESW13890; ESW13890; PHAVU_008G234900g.
DR GeneID; 18623813; -.
DR Gramene; ESW13890; ESW13890; PHAVU_008G234900g.
DR KEGG; pvu:PHAVU_008G234900g; -.
DR eggNOG; KOG3168; Eukaryota.
DR OMA; MGTTKMV; -.
DR OrthoDB; 5475294at2759; -.
DR Proteomes; UP000000226; Chromosome 8.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR CDD; cd01717; Sm_B; 1.
DR Gene3D; 2.30.30.100; -; 1.
DR InterPro; IPR010920; LSM_dom_sf.
DR InterPro; IPR047575; Sm.
DR InterPro; IPR001163; Sm_dom_euk/arc.
DR InterPro; IPR017131; snRNP-assoc_SmB/SmN.
DR PANTHER; PTHR10701:SF0; SMALL NUCLEAR RIBONUCLEOPROTEIN-ASSOCIATED PROTEIN B; 1.
DR PANTHER; PTHR10701; SMALL NUCLEAR RIBONUCLEOPROTEIN-ASSOCIATED PROTEIN B AND N; 1.
DR Pfam; PF01423; LSM; 1.
DR PIRSF; PIRSF037187; snRNP_SmB/SmN; 2.
DR SMART; SM00651; Sm; 1.
DR SUPFAM; SSF50182; Sm-like ribonucleoproteins; 1.
DR PROSITE; PS52002; SM; 1.
PE 3: Inferred from homology;
KW Nucleus {ECO:0000256|PIRNR:PIRNR037187};
KW Reference proteome {ECO:0000313|Proteomes:UP000000226};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274,
KW ECO:0000256|PIRNR:PIRNR037187};
KW RNA-binding {ECO:0000256|PIRNR:PIRNR037187}.
FT DOMAIN 4..90
FT /note="Sm"
FT /evidence="ECO:0000259|PROSITE:PS52002"
FT REGION 137..280
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 152..280
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 280 AA; 29083 MW; 1460C813B8932184 CRC64;
MSMSKSSKML QYINYRMRVT IQDGRQLVGK FMAFDRHMNL VLGDCEEFRK LPPAKGKKPA
DGGDLEDRRT LGLLLLRGEE VISMTVEGPP PPEESRSKAV SAAALAGPGI GRAAGRGIPP
APGIQAQPGL AGPVRGVGGP APGMMQPQIS RPPHLNAPPV SYPGGPPVMR PPGQMPGQFA
PPPMARGPPP PMPPGQFGPP RSGGAPPQFS VPPPQFGQRP MGPPPPGQMV RGPPAPPRPG
MPGPPPPRPG MPPPPGSGVP VFGPPRPGMP PPPNPPNQQQ
//
