ID V7BDY4_PHAVU Unreviewed; 421 AA.
AC V7BDY4;
DT 19-FEB-2014, integrated into UniProtKB/TrEMBL.
DT 19-FEB-2014, sequence version 1.
DT 27-MAR-2024, entry version 54.
DE RecName: Full=HMG box domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=PHAVU_007G006000g {ECO:0000313|EMBL:ESW14656.1};
OS Phaseolus vulgaris (Kidney bean) (French bean).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Phaseolus.
OX NCBI_TaxID=3885 {ECO:0000313|EMBL:ESW14656.1, ECO:0000313|Proteomes:UP000000226};
RN [1] {ECO:0000313|EMBL:ESW14656.1}
RP NUCLEOTIDE SEQUENCE.
RA Schmutz J., McClean P., Shu S., Cregan P., Rokhsar D., Jackson S.;
RL Submitted (APR-2013) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Proteomes:UP000000226}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. G19833 {ECO:0000313|Proteomes:UP000000226};
RX PubMed=24908249; DOI=10.1038/ng.3008;
RA Schmutz J., McClean P.E., Mamidi S., Wu G.A., Cannon S.B., Grimwood J.,
RA Jenkins J., Shu S., Song Q., Chavarro C., Torres-Torres M., Geffroy V.,
RA Moghaddam S.M., Gao D., Abernathy B., Barry K., Blair M., Brick M.A.,
RA Chovatia M., Gepts P., Goodstein D.M., Gonzales M., Hellsten U.,
RA Hyten D.L., Jia G., Kelly J.D., Kudrna D., Lee R., Richard M.M.,
RA Miklas P.N., Osorno J.M., Rodrigues J., Thareau V., Urrea C.A., Wang M.,
RA Yu Y., Zhang M., Wing R.A., Cregan P.B., Rokhsar D.S., Jackson S.A.;
RT "A reference genome for common bean and genome-wide analysis of dual
RT domestications.";
RL Nat. Genet. 46:707-713(2014).
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CM002294; ESW14655.1; -; Genomic_DNA.
DR EMBL; CM002294; ESW14656.1; -; Genomic_DNA.
DR RefSeq; XP_007142661.1; XM_007142599.1.
DR RefSeq; XP_007142662.1; XM_007142600.1.
DR AlphaFoldDB; V7BDY4; -.
DR STRING; 3885.V7BDY4; -.
DR EnsemblPlants; ESW14655; ESW14655; PHAVU_007G006000g.
DR EnsemblPlants; ESW14656; ESW14656; PHAVU_007G006000g.
DR GeneID; 18624467; -.
DR Gramene; ESW14655; ESW14655; PHAVU_007G006000g.
DR Gramene; ESW14656; ESW14656; PHAVU_007G006000g.
DR KEGG; pvu:PHAVU_007G006000g; -.
DR eggNOG; KOG0381; Eukaryota.
DR eggNOG; KOG2744; Eukaryota.
DR OMA; EQNVDMA; -.
DR OrthoDB; 316588at2759; -.
DR Proteomes; UP000000226; Chromosome 7.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-UniRule.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR CDD; cd16872; ARID_HMGB9-like; 1.
DR CDD; cd22009; HMG-box_AtHMGB9-like; 1.
DR Gene3D; 1.10.150.60; ARID DNA-binding domain; 1.
DR Gene3D; 1.10.30.10; High mobility group box domain; 1.
DR InterPro; IPR001606; ARID_dom.
DR InterPro; IPR036431; ARID_dom_sf.
DR InterPro; IPR045303; ARID_HMGB9-like.
DR InterPro; IPR009071; HMG_box_dom.
DR InterPro; IPR036910; HMG_box_dom_sf.
DR PANTHER; PTHR46691:SF3; HIGH MOBILITY GROUP B PROTEIN 15; 1.
DR PANTHER; PTHR46691; HIGH MOBILITY GROUP B PROTEIN 9; 1.
DR Pfam; PF01388; ARID; 1.
DR Pfam; PF00505; HMG_box; 1.
DR PRINTS; PR00886; HIGHMOBLTY12.
DR SMART; SM01014; ARID; 1.
DR SMART; SM00501; BRIGHT; 1.
DR SMART; SM00398; HMG; 1.
DR SUPFAM; SSF46774; ARID-like; 1.
DR SUPFAM; SSF47095; HMG-box; 1.
DR PROSITE; PS51011; ARID; 1.
DR PROSITE; PS50118; HMG_BOX_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00267};
KW Nucleus {ECO:0000256|PROSITE-ProRule:PRU00267};
KW Reference proteome {ECO:0000313|Proteomes:UP000000226}.
FT DOMAIN 35..126
FT /note="ARID"
FT /evidence="ECO:0000259|PROSITE:PS51011"
FT DOMAIN 261..328
FT /note="HMG box"
FT /evidence="ECO:0000259|PROSITE:PS50118"
FT DNA_BIND 261..328
FT /note="HMG box"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00267"
FT REGION 226..268
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 361..399
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 226..240
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 241..255
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 421 AA; 47213 MW; 105C519D78C7F0A1 CRC64;
MASTSGVGSS SIPIKDVATS FRAYPLPLAR YEEIVENSQL FMFTLEKLHA SMGTKYMIPI
VGGRELDLHR LFIEVTSRGG IAKIIRERKW KDVTSVFNFP STATNASFVL RKYYASLLYH
YEQIYFFKAR EWDPTAPDIL QNQSTLVVPP PKIQFPQSLS EIQPGVFQQS NVNAAKLPEA
MATSSAGPPP VIGVIDGKFE SGYLVTVTIG SEKLKGVLYQ APQNPVLHAS DHNNSASASA
GVHRRRRRKK SEIKRRDPAH PKPNRSGYNF FFAEQHARLK ALHHGKDREI SRMIGELWNK
LKESEKTVYQ EKAMKDKERY RAEMEDYREK LKMGQVISDA VPLQQRLPDG DADMLDVDMK
TDEAEGDSLQ TPEESSSGGS DYEDYNKTAE RGFDMDALPV LGMDAETSYM GSEEKSSKGG
L
//
