ID V7BFY5_PHAVU Unreviewed; 269 AA.
AC V7BFY5;
DT 19-FEB-2014, integrated into UniProtKB/TrEMBL.
DT 19-FEB-2014, sequence version 1.
DT 27-MAR-2024, entry version 30.
DE RecName: Full=RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483};
DE EC=2.3.2.27 {ECO:0000256|ARBA:ARBA00012483};
GN ORFNames=PHAVU_007G161400g {ECO:0000313|EMBL:ESW16495.1};
OS Phaseolus vulgaris (Kidney bean) (French bean).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Phaseolus.
OX NCBI_TaxID=3885 {ECO:0000313|EMBL:ESW16495.1, ECO:0000313|Proteomes:UP000000226};
RN [1] {ECO:0000313|Proteomes:UP000000226}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. G19833 {ECO:0000313|Proteomes:UP000000226};
RX PubMed=24908249; DOI=10.1038/ng.3008;
RA Schmutz J., McClean P.E., Mamidi S., Wu G.A., Cannon S.B., Grimwood J.,
RA Jenkins J., Shu S., Song Q., Chavarro C., Torres-Torres M., Geffroy V.,
RA Moghaddam S.M., Gao D., Abernathy B., Barry K., Blair M., Brick M.A.,
RA Chovatia M., Gepts P., Goodstein D.M., Gonzales M., Hellsten U.,
RA Hyten D.L., Jia G., Kelly J.D., Kudrna D., Lee R., Richard M.M.,
RA Miklas P.N., Osorno J.M., Rodrigues J., Thareau V., Urrea C.A., Wang M.,
RA Yu Y., Zhang M., Wing R.A., Cregan P.B., Rokhsar D.S., Jackson S.A.;
RT "A reference genome for common bean and genome-wide analysis of dual
RT domestications.";
RL Nat. Genet. 46:707-713(2014).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine +
CC [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-
CC cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.;
CC EC=2.3.2.27; Evidence={ECO:0000256|ARBA:ARBA00000900};
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DR EMBL; CM002294; ESW16495.1; -; Genomic_DNA.
DR RefSeq; XP_007144501.1; XM_007144439.1.
DR AlphaFoldDB; V7BFY5; -.
DR STRING; 3885.V7BFY5; -.
DR EnsemblPlants; ESW16495; ESW16495; PHAVU_007G161400g.
DR GeneID; 18626064; -.
DR Gramene; ESW16495; ESW16495; PHAVU_007G161400g.
DR KEGG; pvu:PHAVU_007G161400g; -.
DR eggNOG; KOG0800; Eukaryota.
DR OMA; FHWHCAL; -.
DR OrthoDB; 1219569at2759; -.
DR PhylomeDB; V7BFY5; -.
DR Proteomes; UP000000226; Chromosome 7.
DR GO; GO:0009501; C:amyloplast; IEA:EnsemblPlants.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0004842; F:ubiquitin-protein transferase activity; IEA:EnsemblPlants.
DR GO; GO:0009630; P:gravitropism; IEA:EnsemblPlants.
DR CDD; cd16454; RING-H2_PA-TM-RING; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR15710; E3 UBIQUITIN-PROTEIN LIGASE PRAJA; 1.
DR PANTHER; PTHR15710:SF67; E3 UBIQUITIN-PROTEIN LIGASE SGR9, AMYLOPLASTIC; 1.
DR Pfam; PF13639; zf-RING_2; 1.
DR SMART; SM00184; RING; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000000226};
KW Transferase {ECO:0000256|ARBA:ARBA00022679};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00175}.
FT DOMAIN 201..242
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
SQ SEQUENCE 269 AA; 29407 MW; 5583476EF892AE17 CRC64;
MEETSTSTIM AALSTLTPSQ FSDLTHSILS ATLYHHRRLA SLLSSPTLFS LTLHHLHSLS
LPQKTLLIAR HLLSSLHLLT ATSPPPSTAT RQRDLDAALL LLFLCETHNH NPHALEAPFS
QWRINLRTIF SDSLLTLSSA PFGACTGSTV LIPFVETVAR CWRLVGALDC GGGKESGEVA
ASATAVVALP SVEVRAGGTE CVICREEMGI GRDVCELPCQ HLFHWMCILP WLGKRNTCPC
CRFRLPSDDV FGEIQRLWEV LVKTGAKDS
//
