ID V7BYF5_PHAVU Unreviewed; 296 AA.
AC V7BYF5;
DT 19-FEB-2014, integrated into UniProtKB/TrEMBL.
DT 19-FEB-2014, sequence version 1.
DT 27-MAR-2024, entry version 35.
DE RecName: Full=C2H2-type domain-containing protein {ECO:0000259|PROSITE:PS50157};
GN ORFNames=PHAVU_005G127600g {ECO:0000313|EMBL:ESW22103.1};
OS Phaseolus vulgaris (Kidney bean) (French bean).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Phaseolus.
OX NCBI_TaxID=3885 {ECO:0000313|EMBL:ESW22103.1, ECO:0000313|Proteomes:UP000000226};
RN [1] {ECO:0000313|Proteomes:UP000000226}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. G19833 {ECO:0000313|Proteomes:UP000000226};
RX PubMed=24908249; DOI=10.1038/ng.3008;
RA Schmutz J., McClean P.E., Mamidi S., Wu G.A., Cannon S.B., Grimwood J.,
RA Jenkins J., Shu S., Song Q., Chavarro C., Torres-Torres M., Geffroy V.,
RA Moghaddam S.M., Gao D., Abernathy B., Barry K., Blair M., Brick M.A.,
RA Chovatia M., Gepts P., Goodstein D.M., Gonzales M., Hellsten U.,
RA Hyten D.L., Jia G., Kelly J.D., Kudrna D., Lee R., Richard M.M.,
RA Miklas P.N., Osorno J.M., Rodrigues J., Thareau V., Urrea C.A., Wang M.,
RA Yu Y., Zhang M., Wing R.A., Cregan P.B., Rokhsar D.S., Jackson S.A.;
RT "A reference genome for common bean and genome-wide analysis of dual
RT domestications.";
RL Nat. Genet. 46:707-713(2014).
CC -!- SIMILARITY: Belongs to the histone deacetylase HD2 family.
CC {ECO:0000256|ARBA:ARBA00006673}.
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DR EMBL; CM002292; ESW22103.1; -; Genomic_DNA.
DR RefSeq; XP_007150109.1; XM_007150047.1.
DR AlphaFoldDB; V7BYF5; -.
DR EnsemblPlants; ESW22103; ESW22103; PHAVU_005G127600g.
DR GeneID; 18630914; -.
DR Gramene; ESW22103; ESW22103; PHAVU_005G127600g.
DR KEGG; pvu:PHAVU_005G127600g; -.
DR eggNOG; ENOG502QVH6; Eukaryota.
DR OMA; PKGMQTR; -.
DR OrthoDB; 447862at2759; -.
DR Proteomes; UP000000226; Chromosome 5.
DR Gene3D; 2.60.120.340; Nucleoplasmin core domain; 1.
DR InterPro; IPR041232; NPL.
DR InterPro; IPR013087; Znf_C2H2_type.
DR Pfam; PF17800; NPL; 1.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 1.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 1.
PE 3: Inferred from homology;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00042};
KW Reference proteome {ECO:0000313|Proteomes:UP000000226};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00042};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00042}.
FT DOMAIN 270..296
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT REGION 102..296
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 117..159
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 160..199
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 200..216
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 260..290
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 296 AA; 31968 MW; 94443B387CF3C0A4 CRC64;
MEFWGAEVKV GESVKVDPTE FEACIHLSQA ALGEAKKEKP NEPVVVFLKV GEQKFVLGTL
SREKIPQISL ELVLEKEFEL SHSSKNATVH FCGYKAYYSG DDSEEDEFTD SDEDIPLVNT
ENGKPEKKSE EVKAVGSKKP DAKAAAPSKK VKVVEPEKDK EDSDDDSDED EAFGISDEEM
DDADSDDSDE ESGSDEDDDE ETPPPKKADL GKKRPNESAS KTPVSSKKAK NATPEKNDGK
KTGNVGTPHS AKKGGKTPNS EAKSPKSGGL SCKSCSKSFN SDSGLQQHNK AKHGGQ
//
