GenomeNet

Database: UniProt
Entry: V7C9B7_PHAVU
LinkDB: V7C9B7_PHAVU
Original site: V7C9B7_PHAVU 
ID   V7C9B7_PHAVU            Unreviewed;       396 AA.
AC   V7C9B7;
DT   19-FEB-2014, integrated into UniProtKB/TrEMBL.
DT   19-FEB-2014, sequence version 1.
DT   24-JAN-2024, entry version 34.
DE   RecName: Full=arogenate dehydratase {ECO:0000256|ARBA:ARBA00013259};
DE            EC=4.2.1.91 {ECO:0000256|ARBA:ARBA00013259};
GN   ORFNames=PHAVU_003G079600g {ECO:0000313|EMBL:ESW25953.1};
OS   Phaseolus vulgaris (Kidney bean) (French bean).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC   NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Phaseolus.
OX   NCBI_TaxID=3885 {ECO:0000313|EMBL:ESW25953.1, ECO:0000313|Proteomes:UP000000226};
RN   [1] {ECO:0000313|Proteomes:UP000000226}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. G19833 {ECO:0000313|Proteomes:UP000000226};
RX   PubMed=24908249; DOI=10.1038/ng.3008;
RA   Schmutz J., McClean P.E., Mamidi S., Wu G.A., Cannon S.B., Grimwood J.,
RA   Jenkins J., Shu S., Song Q., Chavarro C., Torres-Torres M., Geffroy V.,
RA   Moghaddam S.M., Gao D., Abernathy B., Barry K., Blair M., Brick M.A.,
RA   Chovatia M., Gepts P., Goodstein D.M., Gonzales M., Hellsten U.,
RA   Hyten D.L., Jia G., Kelly J.D., Kudrna D., Lee R., Richard M.M.,
RA   Miklas P.N., Osorno J.M., Rodrigues J., Thareau V., Urrea C.A., Wang M.,
RA   Yu Y., Zhang M., Wing R.A., Cregan P.B., Rokhsar D.S., Jackson S.A.;
RT   "A reference genome for common bean and genome-wide analysis of dual
RT   domestications.";
RL   Nat. Genet. 46:707-713(2014).
CC   -!- PATHWAY: Amino-acid biosynthesis; L-phenylalanine biosynthesis; L-
CC       phenylalanine from L-arogenate: step 1/1.
CC       {ECO:0000256|ARBA:ARBA00004929}.
CC   -!- SUBCELLULAR LOCATION: Plastid, chloroplast stroma
CC       {ECO:0000256|ARBA:ARBA00004470}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; CM002290; ESW25953.1; -; Genomic_DNA.
DR   RefSeq; XP_007153959.1; XM_007153897.1.
DR   AlphaFoldDB; V7C9B7; -.
DR   STRING; 3885.V7C9B7; -.
DR   EnsemblPlants; ESW25953; ESW25953; PHAVU_003G079600g.
DR   GeneID; 18634238; -.
DR   Gramene; ESW25953; ESW25953; PHAVU_003G079600g.
DR   KEGG; pvu:PHAVU_003G079600g; -.
DR   eggNOG; KOG2797; Eukaryota.
DR   OMA; CYPMDTV; -.
DR   OrthoDB; 2783975at2759; -.
DR   UniPathway; UPA00121; UER00344.
DR   Proteomes; UP000000226; Chromosome 3.
DR   GO; GO:0009570; C:chloroplast stroma; IEA:UniProtKB-SubCell.
DR   GO; GO:0047769; F:arogenate dehydratase activity; IEA:UniProtKB-EC.
DR   GO; GO:0004664; F:prephenate dehydratase activity; IEA:InterPro.
DR   GO; GO:0009094; P:L-phenylalanine biosynthetic process; IEA:UniProtKB-UniPathway.
DR   CDD; cd04905; ACT_CM-PDT; 1.
DR   CDD; cd13631; PBP2_Ct-PDT_like; 1.
DR   Gene3D; 3.30.70.260; -; 1.
DR   Gene3D; 3.40.190.10; Periplasmic binding protein-like II; 2.
DR   InterPro; IPR045865; ACT-like_dom_sf.
DR   InterPro; IPR002912; ACT_dom.
DR   InterPro; IPR001086; Preph_deHydtase.
DR   InterPro; IPR018528; Preph_deHydtase_CS.
DR   PANTHER; PTHR21022:SF20; AROGENATE DEHYDRATASE/PREPHENATE DEHYDRATASE 1, CHLOROPLASTIC; 1.
DR   PANTHER; PTHR21022; PREPHENATE DEHYDRATASE P PROTEIN; 1.
DR   Pfam; PF00800; PDT; 1.
DR   SUPFAM; SSF55021; ACT-like; 1.
DR   SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
DR   PROSITE; PS51671; ACT; 1.
DR   PROSITE; PS00857; PREPHENATE_DEHYDR_1; 1.
DR   PROSITE; PS51171; PREPHENATE_DEHYDR_3; 1.
PE   4: Predicted;
KW   Amino-acid biosynthesis {ECO:0000256|ARBA:ARBA00022605};
KW   Aromatic amino acid biosynthesis {ECO:0000256|ARBA:ARBA00023141};
KW   Lyase {ECO:0000256|ARBA:ARBA00023239};
KW   Phenylalanine biosynthesis {ECO:0000256|ARBA:ARBA00023222};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000226}.
FT   DOMAIN          111..286
FT                   /note="Prephenate dehydratase"
FT                   /evidence="ECO:0000259|PROSITE:PS51171"
FT   DOMAIN          300..391
FT                   /note="ACT"
FT                   /evidence="ECO:0000259|PROSITE:PS51671"
SQ   SEQUENCE   396 AA;  43353 MW;  C66147EBA9DF800E CRC64;
     MALKAVSIWG YSKALSPPLG VGLANSHSTP IGNQRYDFDK CRRWESCCLG VLAQTATTAV
     EDEEPNVPPL IDSSGAADGV HQIHKDIIQL PKPLTTIDIS SSSSSDGSKV RVAYQGLPGA
     YSEDAALKAY PKCETVPCDN FESAFKAVEL WLVDKAVLPI ENSVAGSIHR NYELLLRHRL
     HIVGEVQLRV NHCLLGLPGV RKEELKVVVS HPQALDQCEK MLSDLGVVKI GARDTADAAQ
     TVASNCARDT GAIASSRAAE VYGLDILTER IQDDDENITR FLVLARDPII PGTDKPHKTS
     IVFSLEEGPG VLFKALAVFA MRDINLSKIE SCPLKQRPLR VVDDSNQGNS KYFDYLFYID
     IEASMAEPRA QYALGQLQEF ARFLRVLGCY PMDTVL
//
DBGET integrated database retrieval system