GenomeNet

Database: UniProt
Entry: V7CHP9_PHAVU
LinkDB: V7CHP9_PHAVU
Original site: V7CHP9_PHAVU 
ID   V7CHP9_PHAVU            Unreviewed;       326 AA.
AC   V7CHP9;
DT   19-FEB-2014, integrated into UniProtKB/TrEMBL.
DT   19-FEB-2014, sequence version 1.
DT   27-MAR-2024, entry version 28.
DE   RecName: Full=BHLH domain-containing protein {ECO:0000259|PROSITE:PS50888};
GN   ORFNames=PHAVU_003G286400g {ECO:0000313|EMBL:ESW28436.1};
OS   Phaseolus vulgaris (Kidney bean) (French bean).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC   NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Phaseolus.
OX   NCBI_TaxID=3885 {ECO:0000313|EMBL:ESW28436.1, ECO:0000313|Proteomes:UP000000226};
RN   [1] {ECO:0000313|Proteomes:UP000000226}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. G19833 {ECO:0000313|Proteomes:UP000000226};
RX   PubMed=24908249; DOI=10.1038/ng.3008;
RA   Schmutz J., McClean P.E., Mamidi S., Wu G.A., Cannon S.B., Grimwood J.,
RA   Jenkins J., Shu S., Song Q., Chavarro C., Torres-Torres M., Geffroy V.,
RA   Moghaddam S.M., Gao D., Abernathy B., Barry K., Blair M., Brick M.A.,
RA   Chovatia M., Gepts P., Goodstein D.M., Gonzales M., Hellsten U.,
RA   Hyten D.L., Jia G., Kelly J.D., Kudrna D., Lee R., Richard M.M.,
RA   Miklas P.N., Osorno J.M., Rodrigues J., Thareau V., Urrea C.A., Wang M.,
RA   Yu Y., Zhang M., Wing R.A., Cregan P.B., Rokhsar D.S., Jackson S.A.;
RT   "A reference genome for common bean and genome-wide analysis of dual
RT   domestications.";
RL   Nat. Genet. 46:707-713(2014).
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; CM002290; ESW28436.1; -; Genomic_DNA.
DR   RefSeq; XP_007156442.1; XM_007156380.1.
DR   AlphaFoldDB; V7CHP9; -.
DR   EnsemblPlants; ESW28436; ESW28436; PHAVU_003G286400g.
DR   GeneID; 18636363; -.
DR   Gramene; ESW28436; ESW28436; PHAVU_003G286400g.
DR   KEGG; pvu:PHAVU_003G286400g; -.
DR   OrthoDB; 404909at2759; -.
DR   Proteomes; UP000000226; Chromosome 3.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR   GO; GO:0031326; P:regulation of cellular biosynthetic process; IEA:UniProt.
DR   GO; GO:0080090; P:regulation of primary metabolic process; IEA:UniProt.
DR   Gene3D; 4.10.280.10; Helix-loop-helix DNA-binding domain; 1.
DR   InterPro; IPR011598; bHLH_dom.
DR   InterPro; IPR036638; HLH_DNA-bd_sf.
DR   PANTHER; PTHR31945:SF15; TRANSCRIPTION FACTOR BHLH61-RELATED; 1.
DR   PANTHER; PTHR31945; TRANSCRIPTION FACTOR SCREAM2-RELATED; 1.
DR   Pfam; PF00010; HLH; 1.
DR   SMART; SM00353; HLH; 1.
DR   SUPFAM; SSF47459; HLH, helix-loop-helix DNA-binding domain; 1.
DR   PROSITE; PS50888; BHLH; 1.
PE   4: Predicted;
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000226};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT   DOMAIN          158..207
FT                   /note="BHLH"
FT                   /evidence="ECO:0000259|PROSITE:PS50888"
FT   REGION          139..163
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        145..163
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   326 AA;  36488 MW;  E2D7149DDF21E670 CRC64;
     MELSQLGFLD ELVAPRRDTW NAFSTGFLDL LSNGWTFDTF LENPSLATSN SLFGAFSAPL
     DRRSECPFIN DVPPYPFADG FAMPLPELHP GNDDPPPPLP PTMEDKEIAF HDNNNNSNNF
     EETKGVCKVE EQGSEIPLFN IGMSDDGERK PKTKKLEGQP SKNLMAERRR RKRLNDRLSM
     LRSIVPKISK MDRTSILGDT IDYMKELLER IGKLQEEEVE GGTSQINLLG ISKEQIKPNE
     AMFDVERRDQ DTRISICCAT KPGLLLSTVN TLEALGLEIQ QCVVSSFNDF SMEASCSEVG
     DQRNCIGPEE IKQSLFRNAG FVGKCL
//
DBGET integrated database retrieval system