ID V7CQ38_PHAVU Unreviewed; 982 AA.
AC V7CQ38;
DT 19-FEB-2014, integrated into UniProtKB/TrEMBL.
DT 19-FEB-2014, sequence version 1.
DT 27-MAR-2024, entry version 50.
DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ESW32214.1};
GN ORFNames=PHAVU_002G303000g {ECO:0000313|EMBL:ESW32214.1};
OS Phaseolus vulgaris (Kidney bean) (French bean).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Phaseolus.
OX NCBI_TaxID=3885 {ECO:0000313|EMBL:ESW32214.1, ECO:0000313|Proteomes:UP000000226};
RN [1] {ECO:0000313|Proteomes:UP000000226}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. G19833 {ECO:0000313|Proteomes:UP000000226};
RX PubMed=24908249; DOI=10.1038/ng.3008;
RA Schmutz J., McClean P.E., Mamidi S., Wu G.A., Cannon S.B., Grimwood J.,
RA Jenkins J., Shu S., Song Q., Chavarro C., Torres-Torres M., Geffroy V.,
RA Moghaddam S.M., Gao D., Abernathy B., Barry K., Blair M., Brick M.A.,
RA Chovatia M., Gepts P., Goodstein D.M., Gonzales M., Hellsten U.,
RA Hyten D.L., Jia G., Kelly J.D., Kudrna D., Lee R., Richard M.M.,
RA Miklas P.N., Osorno J.M., Rodrigues J., Thareau V., Urrea C.A., Wang M.,
RA Yu Y., Zhang M., Wing R.A., Cregan P.B., Rokhsar D.S., Jackson S.A.;
RT "A reference genome for common bean and genome-wide analysis of dual
RT domestications.";
RL Nat. Genet. 46:707-713(2014).
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DR EMBL; CM002289; ESW32214.1; -; Genomic_DNA.
DR RefSeq; XP_007160220.1; XM_007160158.1.
DR AlphaFoldDB; V7CQ38; -.
DR STRING; 3885.V7CQ38; -.
DR EnsemblPlants; ESW32214; ESW32214; PHAVU_002G303000g.
DR GeneID; 18639590; -.
DR Gramene; ESW32214; ESW32214; PHAVU_002G303000g.
DR KEGG; pvu:PHAVU_002G303000g; -.
DR eggNOG; KOG0948; Eukaryota.
DR OMA; MTCHLGD; -.
DR OrthoDB; 1352at2759; -.
DR Proteomes; UP000000226; Chromosome 2.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0003724; F:RNA helicase activity; IEA:InterPro.
DR GO; GO:0006401; P:RNA catabolic process; IEA:InterPro.
DR CDD; cd18024; DEXHc_Mtr4-like; 1.
DR CDD; cd13154; KOW_Mtr4; 1.
DR CDD; cd18795; SF2_C_Ski2; 1.
DR Gene3D; 1.10.3380.30; -; 1.
DR Gene3D; 2.40.30.300; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR048392; MTR4-like_stalk.
DR InterPro; IPR025696; MTR4_beta-barrel.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR016438; SKI2-like.
DR InterPro; IPR012961; Ski2/MTR4_C.
DR PANTHER; PTHR12131; ATP-DEPENDENT RNA AND DNA HELICASE; 1.
DR PANTHER; PTHR12131:SF32; DEXH-BOX ATP-DEPENDENT RNA HELICASE DEXH10; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF08148; DSHCT; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF21408; MTR4-like_stalk; 1.
DR Pfam; PF13234; MTR4_beta-barrel; 1.
DR PIRSF; PIRSF005198; Antiviral_helicase_SKI2; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM01142; DSHCT; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Helicase {ECO:0000256|ARBA:ARBA00022806};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000000226}.
FT DOMAIN 87..243
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 319..520
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 1..39
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 295..314
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..20
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 982 AA; 110712 MW; D44402FEE3F643A3 CRC64;
MENEKKESPS LGKRREPELP AAVPDTASKP KRARSAERTC VHEVAVPSGY VSNKDSELHG
TLSNPLHNGA MAKSYPFALD PFQQVSIACL ERNESVLVSA HTSAGKTAVA EYAIAMSFRD
RQRVIYTSPL KALSNQKYRE LSQEFTDVGL MTGDVTLSPN ATCLVMTTEI LRGMLYRGSE
VLKEVAWVIF DEIHYMKDRE RGVVWEESIV FLPPAIKMVF LSATMSNATE FAEWICNIHK
QPCHVVYTDF RPTPLQHYAF PIGGSGLYLV VDENEQFRED NFLKLHDTFV KQNLADGRRG
GKSGGRGGRG GNASSGGSDI YKIVKMIMER KFQPVIIFSF SRRECEQHAM SMSKLDFNTP
EEKENVEQVF RNAVLCLNEE DRCLPAIELM LPLLQRGIAV HHSGLLPVIK ELVELLFQEG
LVKALFATET FAMGLNMPAK TVVFTAVKKW DGDSHRYIGS GEYIQMSGRA GRRGKDERGI
CIIMIDEQME MNNLKDMVLG KPAPLVSTFR LSYYSILNLM SRAEGQFTAE HVIRNSFHQF
QYEKALPDIE KRVSNLEQEV TLLDASGEAE VSEYHKLKLE IAQLEKKMMA KIIRPEIILY
FLVPGRLIKV REGGTDWGWG VVVNVVKKPS GGGYIVDTLL QCSPCSSENN SRPKPYPPRP
GEKGEMHVVP VQLPLISTLG KLRVSIPSDL RPLEARQSVL LALHELINRF PGGIPKLNPV
KDMDVRDSEI VEVVNQIEEI EKKMFAHPMH KHQDVDQIKC FERKAEVNHE IQQLKTKMRD
SQLQKFREEL KNRSRVLRKL GHIDTDGVVQ LKGRAACLVD TGDELLVTEL MFNGTFNDLD
HHQVAALASC FIPGDKSNEQ IQLRTELARP LQQLQDSARR IAEIQHECKL DINVDEYVES
TVRPYLMDVI YSWSKGANFA DVIQMTDIFE GSIIRSARRL DEFLNQLRAA ANAVGEADLE
NKFAAASESL RRGIMFANSL YL
//
