ID V9EMP0_PHYPR Unreviewed; 3367 AA.
AC V9EMP0;
DT 19-FEB-2014, integrated into UniProtKB/TrEMBL.
DT 19-FEB-2014, sequence version 1.
DT 24-JAN-2024, entry version 40.
DE RecName: Full=RING-type domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=F443_14683 {ECO:0000313|EMBL:ETI39763.1};
OS Phytophthora parasitica P1569.
OC Eukaryota; Sar; Stramenopiles; Oomycota; Peronosporales; Peronosporaceae;
OC Phytophthora.
OX NCBI_TaxID=1317065 {ECO:0000313|EMBL:ETI39763.1, ECO:0000313|Proteomes:UP000018721};
RN [1] {ECO:0000313|EMBL:ETI39763.1, ECO:0000313|Proteomes:UP000018721}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=P1569 {ECO:0000313|EMBL:ETI39763.1,
RC ECO:0000313|Proteomes:UP000018721};
RG The Broad Institute Genomics Platform;
RA Russ C., Tyler B., Panabieres F., Shan W., Tripathy S., Grunwald N.,
RA Machado M., Johnson C.S., Arredondo F., Hong C., Coffey M., Young S.K.,
RA Zeng Q., Gargeya S., Fitzgerald M., Abouelleil A., Alvarado L.,
RA Chapman S.B., Gainer-Dewar J., Goldberg J., Griggs A., Gujja S., Hansen M.,
RA Howarth C., Imamovic A., Ireland A., Larimer J., McCowan C., Murphy C.,
RA Pearson M., Poon T.W., Priest M., Roberts A., Saif S., Shea T., Sykes S.,
RA Wortman J., Nusbaum C., Birren B.;
RT "The Genome Sequence of Phytophthora parasitica P1569.";
RL Submitted (NOV-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ETI39763.1}.
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DR EMBL; ANIZ01002524; ETI39763.1; -; Genomic_DNA.
DR EnsemblProtists; ETI39763; ETI39763; F443_14683.
DR OrthoDB; 5478899at2759; -.
DR Proteomes; UP000018721; Unassembled WGS sequence.
DR CDD; cd06071; Beach; 1.
DR CDD; cd01201; PH_BEACH; 1.
DR CDD; cd16449; RING-HC; 1.
DR Gene3D; 2.60.120.200; -; 1.
DR Gene3D; 1.10.1540.10; BEACH domain; 1.
DR Gene3D; 2.30.29.30; Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB); 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 2.
DR InterPro; IPR000409; BEACH_dom.
DR InterPro; IPR036372; BEACH_dom_sf.
DR InterPro; IPR013320; ConA-like_dom_sf.
DR InterPro; IPR023362; PH-BEACH_dom.
DR InterPro; IPR011993; PH-like_dom_sf.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR InterPro; IPR001841; Znf_RING.
DR PANTHER; PTHR46108; BLUE CHEESE; 1.
DR PANTHER; PTHR46108:SF4; BLUE CHEESE; 1.
DR Pfam; PF02138; Beach; 1.
DR Pfam; PF13385; Laminin_G_3; 1.
DR Pfam; PF14844; PH_BEACH; 1.
DR Pfam; PF00400; WD40; 1.
DR SMART; SM01026; Beach; 1.
DR SMART; SM00320; WD40; 3.
DR SUPFAM; SSF81837; BEACH domain; 1.
DR SUPFAM; SSF49899; Concanavalin A-like lectins/glucanases; 1.
DR SUPFAM; SSF50729; PH domain-like; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS50197; BEACH; 1.
DR PROSITE; PS51783; PH_BEACH; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Reference proteome {ECO:0000313|Proteomes:UP000018721};
KW WD repeat {ECO:0000256|PROSITE-ProRule:PRU00221};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00175}.
FT DOMAIN 687..725
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT DOMAIN 2377..2527
FT /note="BEACH-type PH"
FT /evidence="ECO:0000259|PROSITE:PS51783"
FT DOMAIN 2550..2857
FT /note="BEACH"
FT /evidence="ECO:0000259|PROSITE:PS50197"
FT REPEAT 3153..3194
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REGION 546..568
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1274..1300
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 2237..2289
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 2331..2350
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 2420..2441
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 2871..2900
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1286..1300
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 2237..2256
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 2331..2345
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 2871..2893
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 3367 AA; 371441 MW; 1D7033AA78FBAD81 CRC64;
MYKRIHSEVC DNQDTFQRSS IHALLAFIAN LIRFDEVYHQ VLRSVGLVST IVALFLDQTN
AVCSDAGATQ IRVEYPTSTV RAGQPNGVSD PVSADEQLII SLMASHCHQR ARRRSSCRTA
TSRSDYLVLI DIMKMFVDGS RSNTAAMDEK HFEHTLCGLP MLESVCMLIG NATFQLEGLA
LWASILQLSL VLQEDSVVLR NVINSLLQAI RYVTLAAYFP QDGDVALVFP GSLEVLQGAL
EYIESLLRPK SASTTAMTKL GDHDGACIEE TSMKERIIGA LLDCDIIVSL LGVLCAVTKK
WELNGTPTSS NDAAVSYSVV MMSLQSIYSI VATNAEAEQQ MCSFIAFGTF GDLISNLLAR
FIDSKPVAQA VNGSEIPGAR PLIQSCLWYC IGFSVDDYDM VYLRGSYPSI DMQKKEEDNP
IRLRYPQLFG IGIQLLVLWA ERIGTSVTHQ LLGTFLRIST SPGNSHRLAS ANVLEVLLRS
FTTVSHSAKD SHRSREDNLS QALLWENNAF HVTAISLVKN VALAGVSLTA ADYWIKMMLS
LCHERPRNSK KSKKADRSSR ARSITPSDSH ASVLSTEIFA SPVPTLMRLL VKMTSATFER
AKGAPGIEFD VSKDGYGCLQ IPDVNARSSS SIEPATTTPS LSTFAHSSKV WPPPDGYSVM
AWFRVDSLDR KDDREKLYRE CFMSNTCIHC RNKIQDECVL KCSHRACRGC IEALLNSGGE
CVVCNPPMFY IFRFRSSDGK SVSEAFLKGG KLYMRTSSNR ASAYQFSHTP ITTGQWYHVV
FTHARQRFQS SMVSCYLNGI LQENVKISYP SGITGSQPLS GLLGVPSQAR RCSSAKWMLG
PFYLLDLPVS PPVVNAVFAA GPSYDRLFFG ATGSNEIGVT FDHLSIPNMV MLDSYMWDPV
RSLIDSVDVE RGGRNKLLRR SLSLASAASS TAAAIVQDIK SSSNVFARIP SAAPLIHIPI
PSERIVVTYS ARNGVAKELS MVPSSKLDGR PSGHLMGGTT LCEAATMADA MFDIRTSGCQ
IAYGLLDEAS TKEEVELALD LLRLCMQSNF RNLAAMENDH GYGVVNYLLH QKASLLSATC
LQTLFRIVGV DFELDAPVRQ SGIEAHHSRD SAIRNVQALQ YFILDYSLWQ KLPGADTAKL
LFSTLYACLA AADEAIRERN RAQLQSMSFI RQLLYVLMDP TVTDGVSRVV VDVILVCLTS
PSRDSIVESN FSDVTSFLAA TLSPRFGRYR SEVVDDEISA EVVLATMSDD EKFDVTERNT
GQFKMHTLAS PTGRLCLSPR GSQRMDSWSD TKDSEEKPGP TKVANARLIS HQAKIQELLL
DALVKAVHKL DIKENRENGE DLDNGTSEMN SVGALKAMAP SSNSAGGAAR MQLPTASRLT
GFRKYLGMRW IEYFLFPGEE TEFSLCIPPS TIIAALRLLC TLLGNSRYEN VFKKEGYYRL
LAQGLPCNHI AFATAAVDQI LVPFPFQKMW YTLFGALLGT PIDGVPTEIR LEIDYLRKDF
EVNIQRDRVV NFSILNVIMV LLRRHFNDPV AMMSTAGDML MVSIVDVDGE PDQKSAGPQS
AVTSASTELN DIHQVEVLDF LHHIFENMPS LHSFVVSGTE KMRQEFMEEL TRLICAAARA
YLIDQYPHSQ GQVTKVLEDK QIALTEYNIA VARAELAEEA AAADSNGSDP FLHHSVSASG
LRLLIAQLMK LLLDAPNGSD FVEEYVAGTA NSAVVLPPLH SGLVLRFQSL VVMGLLDHIR
AKFDDDDILA KHKHFGANVR EFVKFVVGKM HSWQRPQHGD GCPAAFACCG RAHFVGGPSR
LLEMVLFVLA DANIGTCGTS GGGLSVLSTS SSFGGLLSEK LGKGKKRKPF RQLMDRMTRS
AELENLLFEL FTALNAVILH VIHGRGAEVG DEELEAMLQQ IHSHRETVFG SQNTHDKRFL
GCLCRYLLQL LSDSNIRPLQ EAAAHLWIDL MVFQRTFVDD LLTVEIRKSG APPYSVNLMK
NGFDVLLECA DTPEGRQIVQ SSSFAKFSKW LELVGPPLKE LENILDRIYI NFVVETKESV
HETWAAYHKK ANHRKIKYEK QFEARYDWFV SMENAYVESL LRSQQHEFRR QLKWKQDRVD
RQKFVARQWG RLHLDFQRDA LADGKAKEQK VGVNASDNPL LMVEIVNRTR YDIKASSPQH
YCWRLDFTEG PYRMRKRLTR MAQTLEFSRF RGQQSSPARL CETSNKLKPR ISALAPNGDF
YGSGRLQRRY SESDVNLSAT ISREKSPSGT AAHLSTRQRS DESEVGNPRH PAAKRPFATS
ASSSAVLSSR ERLRKGSFEA LFNKYVKNER RPSQSFRFNR LSAGHDSIVE HDASADNEEE
KASDVGGVES STAESAANAG GVVMEDVVDE KLRPLLMPGD EIADIYDCLR IDGMDSCPGV
FLLCNDHVYI VDNYQRQSQP FTSSHTDNGS EHNSQVRVTE VPQGSTTLLE RRLSWRVLES
PHHSQPVSRS RDTHQCRFWA YEDIKELHKR RYQLRHVALE FFANDGRNYL VTLESLEQRE
LVFHALLAKC PNVQGAASGL DGVSGGGDLY SQLRKLLRNS MTERWVQGDI SNFAYLMHLN
TLAGRSYNDL TQYPVFPWVL ADYESEILDL SDPNAYRDLC KPMGALQREE EFRARYDGLL
ESLGAADDDA DDHPLSSRPF HYGTHYSSAA ITLHYLMRLE PFTSHFRRLH GGKFDHADRL
FTSVVGAWKS AAGFEGAQNG TQDVKELIPE FFYLPEFLEN VNKCVFGTSQ TGVVVGDVEL
PPWANGSPTE FVRLNRAALE SPYVSANLHH WIDLIFGYKQ QGPAAVEACN IFYHLTYEGS
VDLDAITDAS TKRAILDQIT EFGQTPSQLF RTPHPVRAVS ASASSNTATN SSLFGGSLGP
SSGASNAQGD SGDGRRVATS PVTTRAALAS SFLEGGEIIS RMQTMLSSGP VLSGTFVGTT
ETTFSPALET SAMLQQDPRR QVPVNPLLAF YRRGQQNSAS CSNTSIHHIA WTSGGVAREE
KVVAVGPKCL LIPPRNNEYL AWGFHDRSVK VVSTGSSEIG GHGSESKVVA CLELDVEIDV
ATITTDGRIV ITSSPGLPVM RVWRFNSTRR SLAASLAAAS GSSSASATSS SAAAVASSLA
AASALSAPHR RRTYTTMGPS STRSLTLMGS VATPTHQHQI TALQASRAYS VLVSGCAGGV
AVLWDLNRRR FIRQLPPISG QDSGRVHSIT TICINEVTGD IVVAAGSTFG VYNINGVLRV
RLDDTVVVFQ DPSALSPVAI TSMAVNRGEA CEWSAEKHVV TGHADGTLCV WAYSQSGGRD
QSEQPQQRRK DEWVIELQGR HKVTPSSAIT AICVTPDKRK LFTGTQDGQL SCWTASTSNS
SPTATHR
//