ID   V9HCD2_9CLOT            Unreviewed;       188 AA.
AC   V9HCD2;
DT   19-FEB-2014, integrated into UniProtKB/TrEMBL.
DT   19-FEB-2014, sequence version 1.
DT   27-MAR-2024, entry version 39.
DE   SubName: Full=Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EEH96750.1};
GN   ORFNames=CSBG_00376 {ECO:0000313|EMBL:EEH96750.1};
OS   Clostridium sp. 7_2_43FAA.
OC   Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae;
OC   Clostridium.
OX   NCBI_TaxID=457396 {ECO:0000313|EMBL:EEH96750.1, ECO:0000313|Proteomes:UP000017809};
RN   [1] {ECO:0000313|EMBL:EEH96750.1, ECO:0000313|Proteomes:UP000017809}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=7_2_43FAA {ECO:0000313|EMBL:EEH96750.1,
RC   ECO:0000313|Proteomes:UP000017809};
RG   The Broad Institute Genome Sequencing Platform;
RA   Earl A., Ward D., Feldgarden M., Gevers D., Allen-Vercoe E., Strauss J.,
RA   Ambrose C., Young S.K., Zeng Q., Gargeya S., Fitzgerald M., Haas B.,
RA   Abouelleil A., Alvarado L., Arachchi H.M., Berlin A., Chapman S.B.,
RA   Gearin G., Goldberg J., Griggs A., Gujja S., Hansen M., Heiman D.,
RA   Howarth C., Larimer J., Lui A., MacDonald P.J.P., McCowen C.,
RA   Montmayeur A., Murphy C., Neiman D., Pearson M., Priest M., Roberts A.,
RA   Saif S., Shea T., Sisk P., Stolte C., Sykes S., Wortman J., Nusbaum C.,
RA   Birren B.;
RT   "The Genome Sequence of Clostridium sp. 7_2_43FAA.";
RL   Submitted (JAN-2012) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:EEH96750.1}.
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DR   EMBL; ACDK02000037; EEH96750.1; -; Genomic_DNA.
DR   RefSeq; WP_008680697.1; NZ_JH815222.1.
DR   AlphaFoldDB; V9HCD2; -.
DR   STRING; 457396.CSBG_00376; -.
DR   GeneID; 65400263; -.
DR   eggNOG; COG1595; Bacteria.
DR   HOGENOM; CLU_107136_0_0_9; -.
DR   OrthoDB; 1954605at2; -.
DR   Proteomes; UP000017809; Unassembled WGS sequence.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR   Gene3D; 1.20.140.160; -; 1.
DR   InterPro; IPR024760; HTH_dom_conjug_TS-like.
DR   InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR   InterPro; IPR013325; RNA_pol_sigma_r2.
DR   InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR   NCBIfam; TIGR02937; sigma70-ECF; 1.
DR   PANTHER; PTHR30385; SIGMA FACTOR F FLAGELLAR; 1.
DR   Pfam; PF12645; HTH_16; 1.
DR   SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR   SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
PE   4: Predicted;
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW   Reference proteome {ECO:0000313|Proteomes:UP000017809};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT   DOMAIN          3..59
FT                   /note="Helix-turn-helix conjugative transposon-like"
FT                   /evidence="ECO:0000259|Pfam:PF12645"
SQ   SEQUENCE   188 AA;  22388 MW;  08ED1C70FDE60789 CRC64;
     MNQLIVRAKH GDKKSMEEIL KNFEPLVYKT SISYYIYGYS EEDIKQIARL TIIESVEKFN
     TDLSDSFPAY VQKCIKNKMY KEIEKATNKY YENKLNREIT NSIDIEEIID KDTDVLEECI
     KKELSGILFK SIEKLNKEEK ALLNTIYVQG ITLKEYSKRT NIEYHKLRYM KDKIMEKLRN
     DSNLLKIR
//