ID V9LY61_BRANA Unreviewed; 317 AA.
AC V9LY61;
DT 19-MAR-2014, integrated into UniProtKB/TrEMBL.
DT 19-MAR-2014, sequence version 1.
DT 27-MAR-2024, entry version 40.
DE RecName: Full=WRKY transcription factor {ECO:0000256|PIRNR:PIRNR038130};
GN Name=WRKY8.1 {ECO:0000313|EMBL:AGA37234.1};
GN Synonyms=BnaA02g24470D {ECO:0000313|EMBL:CDY43969.1};
GN ORFNames=DARMORV10_A02P29880.1 {ECO:0000313|EMBL:CAF2142406.1},
GN GSBRNA2T00079355001 {ECO:0000313|EMBL:CDY43969.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:AGA37234.1};
RN [1] {ECO:0000313|EMBL:AGA37234.1}
RP NUCLEOTIDE SEQUENCE.
RA Li C., Liang W., Wang C., Jiang Y., Yang B.;
RT "Identification and expression analysis of BnaSUMO in response to biotic
RT and abiotic stresses.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:CDY43969.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
RN [3] {ECO:0000313|EMBL:CDY43969.1}
RP NUCLEOTIDE SEQUENCE.
RA Genoscope - CEA;
RL Submitted (JUN-2014) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|EMBL:CAF2142406.1}
RP NUCLEOTIDE SEQUENCE.
RG Genoscope - CEA;
RA William W.;
RL Submitted (JAN-2021) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|PIRNR:PIRNR038130}.
CC -!- SIMILARITY: Belongs to the WRKY group II-c family.
CC {ECO:0000256|ARBA:ARBA00008964, ECO:0000256|PIRNR:PIRNR038130}.
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DR EMBL; KC246569; AGA37234.1; -; mRNA.
DR EMBL; HG994356; CAF2142406.1; -; Genomic_DNA.
DR EMBL; LK032575; CDY43969.1; -; Genomic_DNA.
DR RefSeq; XP_013704055.1; XM_013848601.1.
DR RefSeq; XP_013704059.1; XM_013848605.1.
DR SMR; V9LY61; -.
DR STRING; 3708.V9LY61; -.
DR PaxDb; 3708-V9LY61; -.
DR EnsemblPlants; CDY43969; CDY43969; GSBRNA2T00079355001.
DR GeneID; 106407727; -.
DR Gramene; CDY43969; CDY43969; GSBRNA2T00079355001.
DR KEGG; bna:106407727; -.
DR OMA; NRRTAMF; -.
DR OrthoDB; 688755at2759; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:UniProtKB-UniRule.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR Gene3D; 2.20.25.80; WRKY domain; 1.
DR InterPro; IPR017396; TF_WRKY_IIc.
DR InterPro; IPR003657; WRKY_dom.
DR InterPro; IPR036576; WRKY_dom_sf.
DR InterPro; IPR044810; WRKY_plant.
DR PANTHER; PTHR31221:SF187; WRKY TRANSCRIPTION FACTOR; 1.
DR PANTHER; PTHR31221; WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED; 1.
DR Pfam; PF03106; WRKY; 1.
DR PIRSF; PIRSF038130; TF_WRKY_IIc; 1.
DR SMART; SM00774; WRKY; 1.
DR SUPFAM; SSF118290; WRKY DNA-binding domain; 1.
DR PROSITE; PS50811; WRKY; 1.
PE 2: Evidence at transcript level;
KW DNA-binding {ECO:0000256|PIRNR:PIRNR038130};
KW Nucleus {ECO:0000256|PIRNR:PIRNR038130};
KW Reference proteome {ECO:0000313|Proteomes:UP000028999};
KW Transcription {ECO:0000256|PIRNR:PIRNR038130};
KW Transcription regulation {ECO:0000256|PIRNR:PIRNR038130}.
FT DOMAIN 174..239
FT /note="WRKY"
FT /evidence="ECO:0000259|PROSITE:PS50811"
FT REGION 113..168
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 118..168
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 317 AA; 36354 MW; 58DE4F6B72B2E74C CRC64;
MSNETKDLNN YHYTSSYNHY NNINNQNILN LPYVSGPSTY NANMISSQIG YDLQLSPQGV
YESGFELSPS STEFFNPSFD QQNDFHNAFN YNTSNKSQEV VGSGGAIIES ETRISASPSS
EADHHHDEDS GKSLGEREAD DGGKYDQRAQ KVVKTKKKEE KKQREPRVSF VTKTEVEHLE
DGYRWRKYGQ KAVKNSPYPR SYYRCTTQKC NVKKRVERSY QDPTVVITTY ESQHNHPIPT
SRRSALFSGP ATSNYNSPVS DFIINTPRSF SNDDLLRVPY AAVNVNANYQ QQQNQEFQND
YELLKDMFPS VFFKQEP
//
