ID W0VDC2_9BURK Unreviewed; 1016 AA.
AC W0VDC2;
DT 19-MAR-2014, integrated into UniProtKB/TrEMBL.
DT 19-MAR-2014, sequence version 1.
DT 27-MAR-2024, entry version 39.
DE RecName: Full=diguanylate cyclase {ECO:0000256|ARBA:ARBA00012528};
DE EC=2.7.7.65 {ECO:0000256|ARBA:ARBA00012528};
GN ORFNames=GJA_4774 {ECO:0000313|EMBL:CDG85378.1};
OS Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Oxalobacteraceae; Janthinobacterium.
OX NCBI_TaxID=1349767 {ECO:0000313|EMBL:CDG85378.1, ECO:0000313|Proteomes:UP000027604};
RN [1] {ECO:0000313|EMBL:CDG85378.1, ECO:0000313|Proteomes:UP000027604}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NBRC 102515 / DSM 9628 {ECO:0000313|Proteomes:UP000027604};
RX PubMed=25883287; DOI=10.1128/genomeA.00277-15;
RA Graupner K., Lackner G., Hertweck C.;
RT "Genome Sequence of Mushroom Soft-Rot Pathogen Janthinobacterium
RT agaricidamnosum.";
RL Genome Announc. 3:e00277-e00277(2015).
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DR EMBL; HG322949; CDG85378.1; -; Genomic_DNA.
DR RefSeq; WP_038496696.1; NZ_HG322949.1.
DR AlphaFoldDB; W0VDC2; -.
DR STRING; 1349767.GJA_4774; -.
DR KEGG; jag:GJA_4774; -.
DR PATRIC; fig|1349767.4.peg.1400; -.
DR eggNOG; COG2203; Bacteria.
DR eggNOG; COG3614; Bacteria.
DR eggNOG; COG3706; Bacteria.
DR HOGENOM; CLU_000445_70_59_4; -.
DR OrthoDB; 9812260at2; -.
DR Proteomes; UP000027604; Chromosome I.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0003824; F:catalytic activity; IEA:UniProt.
DR GO; GO:0007165; P:signal transduction; IEA:UniProt.
DR CDD; cd01949; GGDEF; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.30.450.350; CHASE domain; 1.
DR Gene3D; 3.30.450.20; PAS domain; 2.
DR InterPro; IPR006189; CHASE_dom.
DR InterPro; IPR042240; CHASE_sf.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR NCBIfam; TIGR00229; sensory_box; 1.
DR PANTHER; PTHR45138:SF9; DIGUANYLATE CYCLASE DGCM-RELATED; 1.
DR PANTHER; PTHR45138; REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM; 1.
DR Pfam; PF03924; CHASE; 1.
DR Pfam; PF13185; GAF_2; 1.
DR Pfam; PF00990; GGDEF; 1.
DR Pfam; PF13188; PAS_8; 1.
DR SMART; SM01079; CHASE; 1.
DR SMART; SM00065; GAF; 1.
DR SMART; SM00267; GGDEF; 1.
DR SUPFAM; SSF55781; GAF domain-like; 1.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 2.
DR PROSITE; PS50839; CHASE; 1.
DR PROSITE; PS50887; GGDEF; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000027604};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}.
FT TRANSMEM 20..39
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 328..348
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 85..311
FT /note="CHASE"
FT /evidence="ECO:0000259|PROSITE:PS50839"
FT DOMAIN 869..1004
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
SQ SEQUENCE 1016 AA; 111543 MW; 0F1D652AA90E2EEF CRC64;
MNKPAAPPTA IRVFPDWMQP RFVAVLTLAI CLGFTVGVWR SARDAAEQQV QADFHYRVRE
LVQQLESRMQ TYLQVLYGVQ GLYNSNGVID RQAFHAYLDV QHIDQHFPGI HGVGYIPQVP
LAAREAHVAA LKAEGFPEYA IRPAGQRALY APIVFLEPFN DSNLRAFGFD VYSEPLRRAA
LERARDSGQA AMTGKIRLVQ DNDAAGLPLP GRAGQFGFLI VLPAYDNSRP SATVAQRRRG
LLGWIFAPFR IDDLMAGLSG AHASLLDLEI YDGDVVSEAS RMYDAAPGAA YGMRRTAQQK
IALAGHRWTV LVGALPGFDE AVTDKPRLIA WAGVLLSLGL TVLTWLLARS RFHAKAALHQ
AGLLTRQLND GQASLLAMAE ASQRSQAMLR SILDSTVDGI LVDTIEGRIF TSNRRFRELW
HVPDALDWQA NGSALFDYLE QQLEQAAPLN LGRQQMPQGH REQRDILQLR DGRVFEQFIR
SMQLGNDVAR LWSFRDITER NQVEQRERTR RHVLELLATG APLGAVLENV VLGVELANPG
MLCSILLLDA EGKHLLVGAA PSLPAFFNAE VHGHSLDTLQ GSCGQVLRSG KRVIAEDIAS
DPLWSAYREL ARRAELGSCW SEPIRGASGK LLGTFAIYHR SAHRPSRTNI ALIEEASHLT
GIAIEQAQSA LALRAGEARF RSLYDNAPVA LWEQDWSALN QALAELDLSG VQDLEHHLLA
APQRLKELAG MVRILDVNAA ALAQVGAAGP GEIASLSLAQ NFDDSAMESF ARTLAALARG
AHLFECESSF LRLDGVERQN ELTLLVMPGH EHSLDFVIVS TLDITERKRM NAELLLLATT
DFLTGLPNRR QFMARLDDEQ ARLQREIESC ASVLMLDIDY FKHINDEYGH AVGDAVLRHL
GGLMRQIQRK VDTLGRVGGE EFAILLPGTD TVAAGLYAER LRRHIAETPL QLSNGYGNIA
VTVSIGIAAM SGAEADCDSV LLRADQALYC AKRGGRNRVE QSISGGSGWI GKQAAN
//
