ID W1IYV4_9GAMM Unreviewed; 813 AA.
AC W1IYV4;
DT 19-MAR-2014, integrated into UniProtKB/TrEMBL.
DT 19-MAR-2014, sequence version 1.
DT 24-JAN-2024, entry version 28.
DE SubName: Full=Putative P4-specific DNA primase {ECO:0000313|EMBL:CDL82811.1};
GN Name=Alpha {ECO:0000313|EMBL:CDL82811.1};
GN ORFNames=XSR1_240057 {ECO:0000313|EMBL:CDL82811.1};
OS Xenorhabdus szentirmaii DSM 16338.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
OC Morganellaceae; Xenorhabdus.
OX NCBI_TaxID=1427518 {ECO:0000313|EMBL:CDL82811.1, ECO:0000313|Proteomes:UP000019202};
RN [1] {ECO:0000313|EMBL:CDL82811.1, ECO:0000313|Proteomes:UP000019202}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 16338 {ECO:0000313|EMBL:CDL82811.1,
RC ECO:0000313|Proteomes:UP000019202};
RA Gualtieri M., Ogier J.C., Pages S., Givaudan A., Gaudriault S.;
RT "Draft genome sequence and annotation of the entomopathogenic bacteria,
RT Xenorhabdus cabanillasi strain JM26 and Xenorhabdus szentirmai strain DSM
RT 16338.";
RL Submitted (NOV-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CDL82811.1}.
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DR EMBL; CBXF010000082; CDL82811.1; -; Genomic_DNA.
DR AlphaFoldDB; W1IYV4; -.
DR STRING; 1427518.XSR1_240057; -.
DR Proteomes; UP000019202; Unassembled WGS sequence.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:1990077; C:primosome complex; IEA:UniProtKB-KW.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003896; F:DNA primase activity; IEA:InterPro.
DR GO; GO:0004386; F:helicase activity; IEA:InterPro.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd01029; TOPRIM_primases; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR Gene3D; 3.90.580.10; Zinc finger, CHC2-type domain; 1.
DR InterPro; IPR004968; DNA_primase/NTPase_C.
DR InterPro; IPR036977; DNA_primase_Znf_CHC2.
DR InterPro; IPR014015; Helicase_SF3_DNA-vir.
DR InterPro; IPR045455; NrS-1_pol-like_helicase.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR014818; Phage/plasmid_primase_P4_C.
DR InterPro; IPR013237; Phage_T7_Gp4_N.
DR InterPro; IPR034154; TOPRIM_DnaG/twinkle.
DR InterPro; IPR006171; TOPRIM_domain.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR35372; ATP BINDING PROTEIN-RELATED; 1.
DR PANTHER; PTHR35372:SF2; SF3 HELICASE DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF08706; D5_N; 1.
DR Pfam; PF19263; DUF5906; 1.
DR Pfam; PF03288; Pox_D5; 1.
DR Pfam; PF08273; Prim_Zn_Ribbon; 1.
DR Pfam; PF13362; Toprim_3; 1.
DR SMART; SM00885; D5_N; 1.
DR SMART; SM00778; Prim_Zn_Ribbon; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR SUPFAM; SSF57783; Zinc beta-ribbon; 1.
DR PROSITE; PS51206; SF3_HELICASE_1; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA replication {ECO:0000256|ARBA:ARBA00022705};
KW DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW Primosome {ECO:0000256|ARBA:ARBA00022515};
KW Reference proteome {ECO:0000313|Proteomes:UP000019202};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT DOMAIN 508..661
FT /note="SF3 helicase"
FT /evidence="ECO:0000259|PROSITE:PS51206"
SQ SEQUENCE 813 AA; 89944 MW; A9CF8D147CA98008 CRC64;
MMADTQHTQT HPKFTLSDKT ARQKPLDLIQ SVKKSAMYHW ENLLPACGIN IPAKDKHGAC
PICGGTDRFH FIDDHHHGNW HCRQCDTPNY GDGLDLVART KGISITEAAK IVAGVLALPL
PESKPARKNN CATQLIADKV ATLMAQSIAG ESPYLAAKGL QYPNQRLLKD GSLLLPLTTL
DKKVTGARLI RPDGKRKHLF GTQKKGAFIA LSEPGEHPDT VIITEGYATA LTVSQLYNGL
ILAALDEGNL CPVAKAVREY WPDTKIIIAA DNDWHEPGER DKNGKPKKNV GKISAEKAAL
TVNGWVALPP DTVKADWDDY RQQHGVETAK LAFVQGLYQP TQTQQKAAIQ PNDVESSKLT
LCQMGASQRG EVLLARYDGD LALDGASEAV HHYDGVIWRP VSNRDLQRDM VAAFMEEKMP
YSPHGISAAV DALKLQLPMM NAPERHLIGF RNGVFDLKIG QFRPHHKHDW LLLANDVEFN
SPVSGETLQS HSPRFWHWLS RATAHCENKA ERVLAALFMV LANRYDWQLF LEVTGAGGSG
KSIFAEICAM LAGKGNTVSA SMAALENPRD RALIVGYSLI ILPDQTRYVG DGSGIKAITG
GDEVAVDPKH KQPYSTRIPA VVLAVNNNAM SFSDRSGGVS RRRVIFNFSE VVPENERDPL
LRDKIAAELP VIIRQLLHWF TDPQTARHLL AEQQKSEEAL DIKRGTDPLV DFCGYLVASH
EADGLLIGNA EIVPFNPRKY LYHAYLAYMK GNNLNKPVSV TRFGMDMPGA LAEYNQHYLR
KKSKQGIRSN LNLNIDTAIE WMPQLVRDSL PEE
//
