ID W1NKM9_AMBTC Unreviewed; 713 AA.
AC W1NKM9;
DT 19-MAR-2014, integrated into UniProtKB/TrEMBL.
DT 19-MAR-2014, sequence version 1.
DT 27-MAR-2024, entry version 47.
DE RecName: Full=AAA+ ATPase domain-containing protein {ECO:0000259|SMART:SM00382};
GN ORFNames=AMTR_s00001p00232760 {ECO:0000313|EMBL:ERM96372.1};
OS Amborella trichopoda.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Amborellales; Amborellaceae; Amborella.
OX NCBI_TaxID=13333 {ECO:0000313|EMBL:ERM96372.1, ECO:0000313|Proteomes:UP000017836};
RN [1] {ECO:0000313|Proteomes:UP000017836}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=24357323;
RG Amborella Genome Project;
RT "The Amborella genome and the evolution of flowering plants.";
RL Science 342:1241089-1241089(2013).
CC -!- COFACTOR:
CC Name=Zn(2+); Xref=ChEBI:CHEBI:29105;
CC Evidence={ECO:0000256|ARBA:ARBA00001947};
CC -!- SIMILARITY: In the C-terminal section; belongs to the peptidase M41
CC family. {ECO:0000256|ARBA:ARBA00010044}.
CC -!- SIMILARITY: In the N-terminal section; belongs to the AAA ATPase
CC family. {ECO:0000256|ARBA:ARBA00010550}.
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DR EMBL; KI397142; ERM96372.1; -; Genomic_DNA.
DR RefSeq; XP_006828956.1; XM_006828893.2.
DR AlphaFoldDB; W1NKM9; -.
DR STRING; 13333.W1NKM9; -.
DR MEROPS; M41.020; -.
DR EnsemblPlants; ERM96372; ERM96372; AMTR_s00001p00232760.
DR GeneID; 18424304; -.
DR Gramene; ERM96372; ERM96372; AMTR_s00001p00232760.
DR KEGG; atr:18424304; -.
DR eggNOG; KOG0731; Eukaryota.
DR HOGENOM; CLU_000688_16_2_1; -.
DR OMA; LFLMNQM; -.
DR OrthoDB; 9585at2759; -.
DR Proteomes; UP000017836; Unassembled WGS sequence.
DR GO; GO:0009534; C:chloroplast thylakoid; IBA:GO_Central.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0004176; F:ATP-dependent peptidase activity; IBA:GO_Central.
DR GO; GO:0004222; F:metalloendopeptidase activity; IEA:InterPro.
DR GO; GO:0006508; P:proteolysis; IBA:GO_Central.
DR CDD; cd19501; RecA-like_FtsH; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 3.30.720.210; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 1.20.58.760; Peptidase M41; 1.
DR HAMAP; MF_01458; FtsH; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR041569; AAA_lid_3.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR003960; ATPase_AAA_CS.
DR InterPro; IPR005936; FtsH.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR000642; Peptidase_M41.
DR InterPro; IPR037219; Peptidase_M41-like.
DR NCBIfam; TIGR01241; FtsH_fam; 1.
DR PANTHER; PTHR23076:SF97; ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 2, CHLOROPLASTIC-RELATED; 1.
DR PANTHER; PTHR23076; METALLOPROTEASE M41 FTSH; 1.
DR Pfam; PF00004; AAA; 1.
DR Pfam; PF17862; AAA_lid_3; 1.
DR Pfam; PF01434; Peptidase_M41; 1.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF140990; FtsH protease domain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00674; AAA; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Metalloprotease {ECO:0000256|ARBA:ARBA00023049};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Protease {ECO:0000256|ARBA:ARBA00022670};
KW Reference proteome {ECO:0000313|Proteomes:UP000017836};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}.
FT TRANSMEM 201..222
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 291..430
FT /note="AAA+ ATPase"
FT /evidence="ECO:0000259|SMART:SM00382"
FT REGION 1..21
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 80..105
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 713 AA; 76249 MW; C250F3BF1A08670C CRC64;
MASSNSFISP PPPTTTTTSS PFIHRSHLLL LLPKRQPSLR RNHRLLFAAS LPRNSPPQAP
HPLPSLALST LLLTSNPSLS LAAIDSPPSP PQSEPSMAVQ AQTQPAASPF ANSLLSAPKP
QSSSPDIPDG SQWRYSEFLN AVKKGKVERV RFSKDGGVLQ LTAVGGRRAT VIVPNDPDLI
DILAMNGVDI SVAEGDSGNG LFNFIGNLFF PLLAFGGLFF LFRRAQGGPG GPGGLGGPMD
FGRSKSKFQE VPETGVTFAD VAGADQAKLE LQEVVDFLKN PDKYTALGAK IPKGCLLVGP
PGTGKTLLAR AVAGEAGVPF FSCAASEFVE LFVGVGASRV RDLFEKAKSK APCIVFIDEI
DAVGRQRGAG LGGGNDEREQ TINQLLTEMD GFSGNSGVIV LAATNRPDVL DAALLRPGRF
DRQVTVDRPD VAGRVKILQV HSRGKALAKD VDFEKIARRT PGFTGADLQN LMNEAAILAA
RRDLKEISKD EISDALERII AGPEKKNAVV SDEKKKLVAY HEAGHALVGA LMPEYDPVAK
ISIIPRGQAG GLTFFAPSEE RLESGLYSRS YLENQMAVAL GGRVAEEVIF GKENVTTGAS
NDFMQVSRVA RQMVERFGFS KKIGQVAIGG PGGNPFLGQQ MSSQKDYSMA TADVVDSEVR
ELVDEAYSRA KHIITTQIDI LHKLAQLLIE KETVDGEEFM SLFIDGKAEL FVA
//
