ID W1NWU3_AMBTC Unreviewed; 472 AA.
AC W1NWU3;
DT 19-MAR-2014, integrated into UniProtKB/TrEMBL.
DT 19-MAR-2014, sequence version 1.
DT 24-JAN-2024, entry version 36.
DE RecName: Full=XS domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=AMTR_s00099p00111970 {ECO:0000313|EMBL:ERM99740.1};
OS Amborella trichopoda.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Amborellales; Amborellaceae; Amborella.
OX NCBI_TaxID=13333 {ECO:0000313|EMBL:ERM99740.1, ECO:0000313|Proteomes:UP000017836};
RN [1] {ECO:0000313|Proteomes:UP000017836}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=24357323;
RG Amborella Genome Project;
RT "The Amborella genome and the evolution of flowering plants.";
RL Science 342:1241089-1241089(2013).
CC -!- SIMILARITY: Belongs to the SGS3 family.
CC {ECO:0000256|ARBA:ARBA00024022}.
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DR EMBL; KI394994; ERM99740.1; -; Genomic_DNA.
DR RefSeq; XP_006836887.1; XM_006836824.2.
DR AlphaFoldDB; W1NWU3; -.
DR STRING; 13333.W1NWU3; -.
DR EnsemblPlants; ERM99740; ERM99740; AMTR_s00099p00111970.
DR GeneID; 18427778; -.
DR Gramene; ERM99740; ERM99740; AMTR_s00099p00111970.
DR KEGG; atr:18427778; -.
DR eggNOG; ENOG502QPU5; Eukaryota.
DR HOGENOM; CLU_046052_0_0_1; -.
DR OrthoDB; 1222097at2759; -.
DR Proteomes; UP000017836; Unassembled WGS sequence.
DR GO; GO:0051607; P:defense response to virus; IEA:InterPro.
DR GO; GO:0031047; P:regulatory ncRNA-mediated gene silencing; IEA:UniProtKB-KW.
DR Gene3D; 3.30.70.2890; XS domain; 1.
DR InterPro; IPR044287; SGS3.
DR InterPro; IPR005380; XS_domain.
DR InterPro; IPR038588; XS_domain_sf.
DR InterPro; IPR005381; Znf-XS_domain.
DR PANTHER; PTHR46602; PROTEIN SUPPRESSOR OF GENE SILENCING 3; 1.
DR PANTHER; PTHR46602:SF1; PROTEIN SUPPRESSOR OF GENE SILENCING 3; 1.
DR Pfam; PF03468; XS; 1.
DR Pfam; PF03470; zf-XS; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054};
KW Reference proteome {ECO:0000313|Proteomes:UP000017836};
KW RNA-mediated gene silencing {ECO:0000256|ARBA:ARBA00023158}.
FT DOMAIN 249..285
FT /note="Zinc finger-XS"
FT /evidence="ECO:0000259|Pfam:PF03470"
FT DOMAIN 320..434
FT /note="XS"
FT /evidence="ECO:0000259|Pfam:PF03468"
FT REGION 1..45
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 61..214
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 70..102
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 138..162
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 163..188
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 189..206
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 472 AA; 53993 MW; 6C607F873F08656F CRC64;
MLPKKNSNPG GANSSPKTKS TIENQHWGSS SGSHETTRTN PASWADASEF SVDVVEDWGE
WEAQGRKSRK PKQQQNTVQP DPRPSNLSGR APNNNWHQQS HEPKKQVNSR ENPWLQTSKW
EADYIGPPPV IPPPLENGWQ WQWQSQAGSL NRASNESKDK TQVGDPSSIR EDDRSPDVED
HKFADSPSES DDLEEDSDDD LLSDGDYDSD ISQKSHSELK KNKWYNKFFE TMDELTVEDI
NDPLRQWHCP ACAGGPGAID WYKGMQPLVT HAKTKGSNRV RLHRKFAELL EEELQRRGTS
AIPAGELFGK WKGLHDAVAD HEIVWPPMVI IQNTLLDRND NDMWTGMGNP ELVEYFKAYE
PAKARHSYGS QGHRGLSVLL FDASAIGYLK AECLHKHFME EGRDRDTWDR RRVLFHPGGK
RVLYGYLATK EDMDSFNRYC DSLFSLYSCY MYTFPHLIPF INEKGFDREH CQ
//
