ID   W1NX98_AMBTC            Unreviewed;      1044 AA.
AC   W1NX98;
DT   19-MAR-2014, integrated into UniProtKB/TrEMBL.
DT   19-MAR-2014, sequence version 1.
DT   27-MAR-2024, entry version 49.
DE   RecName: Full=RNA helicase {ECO:0000256|ARBA:ARBA00012552};
DE            EC=3.6.4.13 {ECO:0000256|ARBA:ARBA00012552};
GN   ORFNames=AMTR_s00110p00073830 {ECO:0000313|EMBL:ERM99915.1};
OS   Amborella trichopoda.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Amborellales; Amborellaceae; Amborella.
OX   NCBI_TaxID=13333 {ECO:0000313|EMBL:ERM99915.1, ECO:0000313|Proteomes:UP000017836};
RN   [1] {ECO:0000313|Proteomes:UP000017836}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=24357323;
RG   Amborella Genome Project;
RT   "The Amborella genome and the evolution of flowering plants.";
RL   Science 342:1241089-1241089(2013).
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DR   EMBL; KI394965; ERM99915.1; -; Genomic_DNA.
DR   RefSeq; XP_006837062.1; XM_006836999.2.
DR   AlphaFoldDB; W1NX98; -.
DR   STRING; 13333.W1NX98; -.
DR   EnsemblPlants; ERM99915; ERM99915; AMTR_s00110p00073830.
DR   GeneID; 18427957; -.
DR   Gramene; ERM99915; ERM99915; AMTR_s00110p00073830.
DR   KEGG; atr:18427957; -.
DR   eggNOG; KOG0923; Eukaryota.
DR   HOGENOM; CLU_001832_7_1_1; -.
DR   OMA; HITLMNV; -.
DR   OrthoDB; 5488182at2759; -.
DR   Proteomes; UP000017836; Unassembled WGS sequence.
DR   GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR   GO; GO:0004386; F:helicase activity; IBA:GO_Central.
DR   GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR   GO; GO:0003724; F:RNA helicase activity; IEA:UniProtKB-EC.
DR   CDD; cd18791; SF2_C_RHA; 1.
DR   Gene3D; 1.20.120.1080; -; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR   InterPro; IPR003593; AAA+_ATPase.
DR   InterPro; IPR011709; DEAD-box_helicase_OB_fold.
DR   InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS.
DR   InterPro; IPR048333; HA2_WH.
DR   InterPro; IPR007502; Helicase-assoc_dom.
DR   InterPro; IPR014001; Helicase_ATP-bd.
DR   InterPro; IPR001650; Helicase_C.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   PANTHER; PTHR18934; ATP-DEPENDENT RNA HELICASE; 1.
DR   PANTHER; PTHR18934:SF83; PRE-MRNA-SPLICING FACTOR ATP-DEPENDENT RNA HELICASE DHX16; 1.
DR   Pfam; PF13401; AAA_22; 1.
DR   Pfam; PF21010; HA2_C; 1.
DR   Pfam; PF04408; HA2_N; 1.
DR   Pfam; PF00271; Helicase_C; 1.
DR   Pfam; PF07717; OB_NTP_bind; 1.
DR   SMART; SM00487; DEXDc; 1.
DR   SMART; SM00847; HA2; 1.
DR   SMART; SM00490; HELICc; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR   PROSITE; PS00690; DEAH_ATP_HELICASE; 1.
DR   PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR   PROSITE; PS51194; HELICASE_CTER; 1.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW   mRNA processing {ECO:0000256|ARBA:ARBA00022664};
KW   mRNA splicing {ECO:0000256|ARBA:ARBA00023187};
KW   Reference proteome {ECO:0000313|Proteomes:UP000017836}.
FT   DOMAIN          413..576
FT                   /note="Helicase ATP-binding"
FT                   /evidence="ECO:0000259|PROSITE:PS51192"
FT   DOMAIN          601..774
FT                   /note="Helicase C-terminal"
FT                   /evidence="ECO:0000259|PROSITE:PS51194"
FT   REGION          101..204
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          223..250
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COMPBIAS        139..204
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1044 AA;  119207 MW;  1CB7201DCECF625C CRC64;
     MGHEDNLRTW VSDKLYSVLG YSQPAVVSFI IGLAKKASSP ADAASKLKEF GFPASAETHE
     FAKEIYMKVP HKAAGLNSYQ KAEKEAAMLV KKQQEYALLD ADDEDDPEPP LPVAPKSRQK
     QIRKKRQIED DDDDDEDILQ NTKERRVKKH TTEGESEDDS SESEESRRID QQERAKLEKR
     LREKDAARTR KTTEPTLSRK EQEEAIRRAK ALEQNDLATL RQVSRQEYLK KREQKKLEEL
     RDDIEDEQYL FEGVKLTEDE LRELRYKKEV YELAKKRADD VDDITEYRMP DAYDQEGGVS
     QDKRFAVAIQ RYRDPGAEEK MNPFAEQEAW EKHQIGKATM KFGSLNQKQA AEDYQYVFED
     QIEFIKASVI DGTKYEEGMS PEETEKLAAK TMLEKLQDER KTLPIYPYRE ELLQAVQDHQ
     VLVIVGETGS GKTTQIPQYL HEAGYTKRGK IGCTQPRRVA AMSVAARVAQ EMGVKLGHEV
     GYSIRFEDCT SDKTILKYMT DGMLMREFLG EPDLASYSVI MVDEAHERTL STDILFGLVK
     DITRFRPDIK LLISSATLDA EKFSDYFDSA PIFKIPGRRF PVDIHYTKSP EADYLEASIV
     TVLQIHVTQP PGDVLVFLTG QEEIEAAEEI LKHRTRGLGT RIAELIICPI YANLPTDLQA
     KIFEPTPEGA RKVVLATNIA ETSLTIDGIK YVIDPGFCKM KSYNPRTGME SLLITPISKA
     SALQRAGRSG RTGPGKCFRL YTAYSYQNEL EDNTIPEIQR TNLANVVLTL KSLGINDLVN
     FDFMDSPPSE ALIKALEQLF ALNALNKRGE LTKLGRRMAE FPLDPMLSKM IIASDKYKCS
     EEVITIAAML SVGNSIFYRP KDKQVHADNA RMNFHTGNVG DHIALLKVYN SWKETNYSTQ
     WCYENYIQVR SMKRARDIRD QLEALLERVE IEPSTNENDH ESIRKAITAG YFHNSARLQK
     NGSYRTVKNP QNVHIHPSSG LAEALPRWVV YYELVMTTKE YMRQVIELKP EWLVEIAPHY
     YQLKDVEDSG SRKMPRGQGR ATMD
//