ID W1PCA2_AMBTC Unreviewed; 463 AA.
AC W1PCA2;
DT 19-MAR-2014, integrated into UniProtKB/TrEMBL.
DT 19-MAR-2014, sequence version 1.
DT 27-MAR-2024, entry version 55.
DE RecName: Full=RRM domain-containing protein {ECO:0000259|PROSITE:PS50102};
GN ORFNames=AMTR_s00076p00078090 {ECO:0000313|EMBL:ERN04655.1};
OS Amborella trichopoda.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Amborellales; Amborellaceae; Amborella.
OX NCBI_TaxID=13333 {ECO:0000313|EMBL:ERN04655.1, ECO:0000313|Proteomes:UP000017836};
RN [1] {ECO:0000313|Proteomes:UP000017836}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=24357323;
RG Amborella Genome Project;
RT "The Amborella genome and the evolution of flowering plants.";
RL Science 342:1241089-1241089(2013).
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; KI394182; ERN04655.1; -; Genomic_DNA.
DR RefSeq; XP_006842980.1; XM_006842917.2.
DR RefSeq; XP_011622849.1; XM_011624547.1.
DR RefSeq; XP_011622850.1; XM_011624548.1.
DR AlphaFoldDB; W1PCA2; -.
DR STRING; 13333.W1PCA2; -.
DR EnsemblPlants; ERN04655; ERN04655; AMTR_s00076p00078090.
DR GeneID; 18432816; -.
DR Gramene; ERN04655; ERN04655; AMTR_s00076p00078090.
DR KEGG; atr:18432816; -.
DR eggNOG; KOG1190; Eukaryota.
DR HOGENOM; CLU_015171_6_2_1; -.
DR OMA; IHHVLYP; -.
DR OrthoDB; 4825346at2759; -.
DR Proteomes; UP000017836; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR GO; GO:0006397; P:mRNA processing; IEA:InterPro.
DR GO; GO:0043484; P:regulation of RNA splicing; IBA:GO_Central.
DR CDD; cd12687; RRM1_PTBPH3; 1.
DR CDD; cd12698; RRM3_PTBPH3; 1.
DR CDD; cd12426; RRM4_PTBPH3; 1.
DR Gene3D; 3.30.70.330; -; 4.
DR InterPro; IPR006536; HnRNP-L/PTB.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR021790; PTBP1-like_RRM2.
DR InterPro; IPR034795; PTBPH3_RRM1.
DR InterPro; IPR034797; PTBPH3_RRM3.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR NCBIfam; TIGR01649; hnRNP-L_PTB; 1.
DR PANTHER; PTHR15592; MATRIN 3/NUCLEAR PROTEIN 220-RELATED; 1.
DR PANTHER; PTHR15592:SF18; SMOOTH, ISOFORM T; 1.
DR Pfam; PF00076; RRM_1; 2.
DR Pfam; PF13893; RRM_5; 1.
DR Pfam; PF11835; RRM_8; 1.
DR SMART; SM00360; RRM; 4.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 3.
DR PROSITE; PS50102; RRM; 3.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000017836};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00176}.
FT DOMAIN 6..80
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 276..350
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 386..460
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 193..216
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 463 AA; 50953 MW; 3C5E6576AF89E603 CRC64;
MVEPSKVIHI RNVGHEISEH DLHQLVQPFG AVMKVVMLRA KNQALLQMHD VASAVNALQY
YTTVQPSIRG RNVYIQFSSH QELTTADQNG QGRNNGDQDS QTNRILLVTV HHLLYPITVE
VLHQVFSPYG YVEKIVTFQK AAGFQALIQY EAFQSAVQAR TALQGRNIYD GCCQLDVQFS
NLTELQVHFN NERSRDFTNP SLPADQKGRS SQGAMQPGYN DSGGLYGIQP GGGRPVAFPQ
VGGVGLGPIQ MGAASSIAAA FGGNLPPGIT GTNDRCTLLV SNLNPDKIYE DKLFNLFSIY
GNILRIKMLK NKPDHALIQM GDGFQAELAV HFLKGAMLFG KPMDVNFSKH PHITPGTDTH
DYSGSTLNRF NRNAAKSYRY CCSPTKMIHI STLPPEVTED EIVAHVEEHG TVVGSKLFEV
NGKKQALVLF DTEEQATEAL VCKHATNIDH AVIRISFSQL PSL
//
