ID W1PD68_AMBTC Unreviewed; 930 AA.
AC W1PD68;
DT 19-MAR-2014, integrated into UniProtKB/TrEMBL.
DT 19-MAR-2014, sequence version 1.
DT 27-MAR-2024, entry version 47.
DE RecName: Full=PWI domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=AMTR_s00006p00267030 {ECO:0000313|EMBL:ERN05898.1};
OS Amborella trichopoda.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Amborellales; Amborellaceae; Amborella.
OX NCBI_TaxID=13333 {ECO:0000313|EMBL:ERN05898.1, ECO:0000313|Proteomes:UP000017836};
RN [1] {ECO:0000313|Proteomes:UP000017836}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=24357323;
RG Amborella Genome Project;
RT "The Amborella genome and the evolution of flowering plants.";
RL Science 342:1241089-1241089(2013).
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DR EMBL; KI393980; ERN05898.1; -; Genomic_DNA.
DR RefSeq; XP_006844223.1; XM_006844160.2.
DR AlphaFoldDB; W1PD68; -.
DR STRING; 13333.W1PD68; -.
DR EnsemblPlants; ERN05898; ERN05898; AMTR_s00006p00267030.
DR GeneID; 18434085; -.
DR Gramene; ERN05898; ERN05898; AMTR_s00006p00267030.
DR KEGG; atr:18434085; -.
DR eggNOG; KOG2253; Eukaryota.
DR HOGENOM; CLU_007747_0_0_1; -.
DR OMA; DGCVNKK; -.
DR OrthoDB; 55687at2759; -.
DR Proteomes; UP000017836; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProt.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
DR CDD; cd12446; RRM_RBM25; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR Gene3D; 1.20.1390.10; PWI domain; 1.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR002483; PWI_dom.
DR InterPro; IPR036483; PWI_dom_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR034268; RBM25_RRM.
DR InterPro; IPR000504; RRM_dom.
DR PANTHER; PTHR47334:SF2; RNA-BINDING MOTIF PROTEIN 25; 1.
DR PANTHER; PTHR47334; SPLICING FACTOR PWI DOMAIN-CONTAINING PROTEIN / RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN; 1.
DR Pfam; PF01480; PWI; 1.
DR Pfam; PF00076; RRM_1; 1.
DR SMART; SM00311; PWI; 1.
DR SMART; SM00360; RRM; 1.
DR SUPFAM; SSF101233; PWI domain; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR PROSITE; PS51025; PWI; 1.
DR PROSITE; PS50102; RRM; 1.
PE 4: Predicted;
KW mRNA processing {ECO:0000256|ARBA:ARBA00022664};
KW Reference proteome {ECO:0000313|Proteomes:UP000017836};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176}.
FT DOMAIN 218..298
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 833..930
FT /note="PWI"
FT /evidence="ECO:0000259|PROSITE:PS51025"
FT REGION 1..108
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 312..505
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 520..750
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 766..815
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 18..32
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 33..54
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 62..82
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 83..106
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 312..358
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 366..389
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 416..505
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 520..568
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 575..614
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 667..687
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 705..727
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 930 AA; 105456 MW; 3BA78D7BEB70709F CRC64;
MAVSPSSPSM AGVKPDPQPE SQIPPLSTNP DPLLPTPSSS SSISATTPLF QQNPNPSSTP
NPSPIHSSIQ AVTPSPAASG SLPAVSPSPP VPPAPSFRPM TPQFSPIRPP GIFAMTGTPQ
FQANPMPFVQ APNGFMPMHV PVPGSSAPAM ASAGIPRYPT PFVTMIRPGF PPRPPTAMGA
MPPLSRPPMP GIRVVPPIMS PPVRPAVPII PMMEKPQTTV YVGKIATTVE NDFLLSLLRL
CGPVKSWKRA QDPSNGAPKG FGFCEFESAE GVLRALRLLS KFNVDGQELV LNVNQATRDY
LERYVEKKIE REKQTKEAGN GNAAKEEETA PGVEKNDEQK TLSEELNKET DESNDKANKQ
DTANFGIVTD EDREGDKDAL EKLANMMEER SKTRPLPPPP IPAPGDPSGK SNSEVPTRSR
DGDSDVDIVK SDMAEDKNDD ETTSENKTHD HERPETSSSD RGRRHDRGRE RDREQDLKRE
KERELERYER ERERERLRRE REREQRIREA ERIYKERVKE WESREREKEY QRLHEKEREK
ERERERRREI KDQEEESDED DTRKRRHRSS VYEEKRKKRQ RERDDDMADR LREEEEIAEA
KRRALEEQDK TEEPVLVNGS ENLQKPVEEN NIKVRGNSAE PAEENSLGDE NRTGDVAPRN
GNVSFSGDEP IVDSSSASDT RQNSIAPTRK LGFGLMGSGK RTFVPSVFHE DDDEETHKEK
KMRPLVPIDY STEELEAGQA SMTSGPSPNL AAAAEFAKKI SNVTPKEERV DYEKDRTRRS
SDRSGQRDRE RNEDESKERS RDRENGLDKP KPIENQKLLD AKQLIDMIPK TKEELFSYDI
NWEVYDKHEL HHRMRPWISK KITEFLGEEE ATLVDFIVSS TRDHVKASQM LELLQAILDD
EAEMFVLKMW RMLIFEIKKV ETGLSMKTKA
//
