ID W1PI69_AMBTC Unreviewed; 403 AA.
AC W1PI69;
DT 19-MAR-2014, integrated into UniProtKB/TrEMBL.
DT 19-MAR-2014, sequence version 1.
DT 24-JAN-2024, entry version 43.
DE RecName: Full=C2H2-type domain-containing protein {ECO:0000259|PROSITE:PS50157};
GN ORFNames=AMTR_s00019p00227240 {ECO:0000313|EMBL:ERN07326.1};
OS Amborella trichopoda.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Amborellales; Amborellaceae; Amborella.
OX NCBI_TaxID=13333 {ECO:0000313|EMBL:ERN07326.1, ECO:0000313|Proteomes:UP000017836};
RN [1] {ECO:0000313|Proteomes:UP000017836}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=24357323;
RG Amborella Genome Project;
RT "The Amborella genome and the evolution of flowering plants.";
RL Science 342:1241089-1241089(2013).
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
CC -!- SIMILARITY: Belongs to the REI1 family.
CC {ECO:0000256|ARBA:ARBA00034126}.
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DR EMBL; KI393807; ERN07326.1; -; Genomic_DNA.
DR RefSeq; XP_006845651.1; XM_006845588.2.
DR RefSeq; XP_011623841.1; XM_011625539.1.
DR AlphaFoldDB; W1PI69; -.
DR STRING; 13333.W1PI69; -.
DR EnsemblPlants; ERN07326; ERN07326; AMTR_s00019p00227240.
DR GeneID; 18435545; -.
DR Gramene; ERN07326; ERN07326; AMTR_s00019p00227240.
DR KEGG; atr:18435545; -.
DR eggNOG; KOG2785; Eukaryota.
DR HOGENOM; CLU_018787_0_0_1; -.
DR OMA; FICLWCN; -.
DR OrthoDB; 180831at2759; -.
DR Proteomes; UP000017836; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0030687; C:preribosome, large subunit precursor; IBA:GO_Central.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0042273; P:ribosomal large subunit biogenesis; IBA:GO_Central.
DR InterPro; IPR003604; Matrin/U1-like-C_Znf_C2H2.
DR InterPro; IPR041661; ZN622/Rei1/Reh1_Znf-C2H2.
DR InterPro; IPR040025; Znf622/Rei1/Reh1.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR InterPro; IPR013087; Znf_C2H2_type.
DR PANTHER; PTHR13182; ZINC FINGER PROTEIN 622; 1.
DR PANTHER; PTHR13182:SF8; ZINC FINGER PROTEIN 622; 1.
DR Pfam; PF12756; zf-C2H2_2; 1.
DR SMART; SM00355; ZnF_C2H2; 4.
DR SMART; SM00451; ZnF_U1; 1.
DR SUPFAM; SSF57667; beta-beta-alpha zinc fingers; 2.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 2.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 1.
PE 3: Inferred from homology;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00042};
KW Reference proteome {ECO:0000313|Proteomes:UP000017836};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Ribosome biogenesis {ECO:0000256|ARBA:ARBA00022517};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00042};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00042}.
FT DOMAIN 68..97
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT REGION 84..152
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 127..149
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 403 AA; 45770 MW; F1199E7A4CC72BE3 CRC64;
MPAFTCNACN TEFEDDAQQK IHYKSEWHRY NLKRKVAGIP GVTEALFQAR LSALADERTR
LDQTRMIYSC ALCGKEYRSS KAHAEHLKSR SHAKASQTTN ATVSGITVIR PLPDRGSNKS
SPLNGEQDMD EETEESEEEW EEIDPNEVEE VTQSLESFDV TDSGDGEIGD WDPSRCFICD
LNPDKTVESC VEHMHKAHGF YIPDAEYLKD PQGLLKYVGL KVTRDFMCLY CDERRQPFLS
LEAVRKHMIS KSHCKLPYGE GGDEEDTELE EFYDYSSSFP KGSDNQVVAL DESHGNIELG
YGGAELVITR KTENGNSSKA LGSREFLRYY RQKPRPTSER DAALARALVS RYQNMGVVTV
QSKERVLRMK VLKEMHRSGV EALRTRVGMK NNVIRNLPKN VPY
//
