ID W1PYJ6_AMBTC Unreviewed; 313 AA.
AC W1PYJ6;
DT 19-MAR-2014, integrated into UniProtKB/TrEMBL.
DT 19-MAR-2014, sequence version 1.
DT 27-MAR-2024, entry version 42.
DE RecName: Full=Small ribosomal subunit protein uS17c {ECO:0000256|ARBA:ARBA00035251};
GN ORFNames=AMTR_s00025p00218070 {ECO:0000313|EMBL:ERN12585.1};
OS Amborella trichopoda.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Amborellales; Amborellaceae; Amborella.
OX NCBI_TaxID=13333 {ECO:0000313|EMBL:ERN12585.1, ECO:0000313|Proteomes:UP000017836};
RN [1] {ECO:0000313|Proteomes:UP000017836}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=24357323;
RG Amborella Genome Project;
RT "The Amborella genome and the evolution of flowering plants.";
RL Science 342:1241089-1241089(2013).
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uS17 family.
CC {ECO:0000256|ARBA:ARBA00010254}.
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DR EMBL; KI392614; ERN12585.1; -; Genomic_DNA.
DR RefSeq; XP_006851004.1; XM_006850941.2.
DR AlphaFoldDB; W1PYJ6; -.
DR STRING; 13333.W1PYJ6; -.
DR EnsemblPlants; ERN12585; ERN12585; AMTR_s00025p00218070.
DR GeneID; 18440803; -.
DR Gramene; ERN12585; ERN12585; AMTR_s00025p00218070.
DR KEGG; atr:18440803; -.
DR eggNOG; KOG1075; Eukaryota.
DR eggNOG; KOG1740; Eukaryota.
DR HOGENOM; CLU_889494_0_0_1; -.
DR OrthoDB; 8832at2759; -.
DR Proteomes; UP000017836; Unassembled WGS sequence.
DR GO; GO:0005840; C:ribosome; IEA:InterPro.
DR GO; GO:0004523; F:RNA-DNA hybrid ribonuclease activity; IEA:InterPro.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR CDD; cd06222; RNase_H_like; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR HAMAP; MF_01345_B; Ribosomal_S17_B; 1.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR000266; Ribosomal_uS17.
DR InterPro; IPR019984; Ribosomal_uS17_bact/chlr.
DR InterPro; IPR044730; RNase_H-like_dom_plant.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR002156; RNaseH_domain.
DR InterPro; IPR036397; RNaseH_sf.
DR NCBIfam; TIGR03635; uS17_bact; 1.
DR PANTHER; PTHR47723; OS05G0353850 PROTEIN; 1.
DR PANTHER; PTHR47723:SF17; POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN; 1.
DR Pfam; PF00366; Ribosomal_S17; 1.
DR Pfam; PF13456; RVT_3; 1.
DR PRINTS; PR00973; RIBOSOMALS17.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50879; RNASE_H_1; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000017836};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022730};
KW rRNA-binding {ECO:0000256|ARBA:ARBA00022730}.
FT DOMAIN 141..270
FT /note="RNase H type-1"
FT /evidence="ECO:0000259|PROSITE:PS50879"
FT REGION 88..129
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 313 AA; 34556 MW; 128861D60EAB4262 CRC64;
MKPVVGMVVS NKMQKSVVVA VDRLFHHKVY NRYVKRTSKF MAHDENNECN MGDRVRLDPS
RPLSKHKHWV VAEILKKARI YVPPTQVASN ASTTAMGSPS QVASDASTTA MGSVSKTETP
LSMPSQGLAP TTTTAIWRKP PIGILKLNVD GASSGNPGRA GGGGILRNHQ GKWLIAFASH
YGTTTNVAAE FRALYEGVKL CKEEGYKKII LESDSMMLVD VITHKMVVPW QVWTWWESFW
MLVENYEWSI THTLREGNSA ADFLASMGKN SLTSVVFRQG SNPIPEELVE LVHKDSLALP
DSILETGNDE ETG
//
