ID W1QCY9_OGAPD Unreviewed; 723 AA.
AC W1QCY9;
DT 19-MAR-2014, integrated into UniProtKB/TrEMBL.
DT 19-MAR-2014, sequence version 1.
DT 24-JAN-2024, entry version 46.
DE SubName: Full=ATP-dependent RNA helicase DHR2 {ECO:0000313|EMBL:ESW98906.1};
DE EC=3.6.4.13 {ECO:0000313|EMBL:ESW98906.1};
GN ORFNames=HPODL_04506 {ECO:0000313|EMBL:ESW98906.1};
OS Ogataea parapolymorpha (strain ATCC 26012 / BCRC 20466 / JCM 22074 / NRRL
OS Y-7560 / DL-1) (Yeast) (Hansenula polymorpha).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC Saccharomycetales; Pichiaceae; Ogataea.
OX NCBI_TaxID=871575 {ECO:0000313|EMBL:ESW98906.1, ECO:0000313|Proteomes:UP000008673};
RN [1] {ECO:0000313|EMBL:ESW98906.1, ECO:0000313|Proteomes:UP000008673}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 26012 / BCRC 20466 / JCM 22074 / NRRL Y-7560 / DL-1
RC {ECO:0000313|Proteomes:UP000008673};
RX PubMed=24279325; DOI=10.1186/1471-2164-14-837;
RA Ravin N.V., Eldarov M.A., Kadnikov V.V., Beletsky A.V., Schneider J.,
RA Mardanova E.S., Smekalova E.M., Zvereva M.I., Dontsova O.A., Mardanov A.V.,
RA Skryabin K.G.;
RT "Genome sequence and analysis of methylotrophic yeast Hansenula polymorpha
RT DL1.";
RL BMC Genomics 14:837-837(2013).
RN [2] {ECO:0000313|Proteomes:UP000008673}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 26012 / BCRC 20466 / JCM 22074 / NRRL Y-7560 / DL-1
RC {ECO:0000313|Proteomes:UP000008673};
RA Ravin N.V., Mardanov A.V., Eldarov M.A., Kadnikov V.V., Beletsky A.V.,
RA Zvereva M.I., Smekalova E.M., Dontsova O.A., Skryabin K.G.;
RT "Genome sequence of the methylotrophic yeast Hansenula polymorpha DL1.";
RL Submitted (OCT-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ESW98906.1}.
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DR EMBL; AEOI02000008; ESW98906.1; -; Genomic_DNA.
DR RefSeq; XP_013934789.1; XM_014079314.1.
DR AlphaFoldDB; W1QCY9; -.
DR STRING; 871575.W1QCY9; -.
DR GeneID; 25773934; -.
DR KEGG; opa:HPODL_04506; -.
DR eggNOG; KOG0922; Eukaryota.
DR HOGENOM; CLU_001832_5_10_1; -.
DR OMA; KVKVWRH; -.
DR OrthoDB; 3682876at2759; -.
DR Proteomes; UP000008673; Chromosome V.
DR GO; GO:0005634; C:nucleus; IEA:UniProt.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProt.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0003724; F:RNA helicase activity; IEA:UniProtKB-EC.
DR GO; GO:0022613; P:ribonucleoprotein complex biogenesis; IEA:UniProt.
DR GO; GO:0006396; P:RNA processing; IEA:UniProt.
DR CDD; cd17917; DEXHc_RHA-like; 1.
DR CDD; cd18791; SF2_C_RHA; 1.
DR Gene3D; 1.20.120.1080; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR011709; DEAD-box_helicase_OB_fold.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS.
DR InterPro; IPR048333; HA2_WH.
DR InterPro; IPR007502; Helicase-assoc_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR18934; ATP-DEPENDENT RNA HELICASE; 1.
DR PANTHER; PTHR18934:SF243; ATP-DEPENDENT RNA HELICASE DHR2-RELATED; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF21010; HA2_C; 1.
DR Pfam; PF04408; HA2_N; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF07717; OB_NTP_bind; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00847; HA2; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Helicase {ECO:0000313|EMBL:ESW98906.1};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801, ECO:0000313|EMBL:ESW98906.1};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000008673}.
FT DOMAIN 104..267
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 284..464
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 1..33
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 48..69
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 723 AA; 80999 MW; 785DAB9BFF70C993 CRC64;
MANRQNRKIK FGDDVSGGAV EEAGTMKNTQ TKADTKFVGR QRGRIGKAPV TVDFGSDEDN
SEEENEKLAT GRKPVDIRLI KQKAAKLLPV RESLPVYQVK NELLAQVRSA KVCVLIGETG
SGKSTQIPQF LMDENKKGIA VTQPRRVAAI NLATRVSEEY GCVLGREVGY SVRFNNVSNR
QTKLKYITDG MLLRELMLDP LLSRYSTVII DEAHERTILT DLLLGFLKDL IFNKRADDEF
KVIIMSATLD AERFSQFFEN APIFFVEGRM YPVERYYLGQ PVEDIVDTVI KTVVQLNQTE
PTGDILCFLA GQEDIDRVVD TLNKLAPVLP KEAPILVPMP LYAALPSHVQ MEVFRPVKAN
QRKVILATNI AETSVTVPGI RYVVDSGLRK VKVWRHQLGL STLLIAPISK ASAAQRAGRA
GREAPGKCYR LYRETDYFKL SDNTEPEILR SDVISPVLML KKMGVNDILG WHWLENPGRE
SLVAALQQLY SLNALNDRGQ ITELGEKMVV LPVAPHLAAV LIRAHELGCL GPVIDIVACL
SVDNLLMSPP SERRDEVNER RKDTCKLGTI YGDLLMLKEL FDLYISLADN AERKEWCKQL
CINFKGFKDV LRVRRQIAEY MGMLKMHEGD GSLDAKLVLK AFLSGFLTNT AIGMPDRSYR
TVATGDLVSV HPSSLLFGQR KPAIMYIEYV YTVKGYARAV SMIELEWLQE VAPHLLGSRE
KIN
//