ID W1RTE1_9SPHN Unreviewed; 314 AA.
AC W1RTE1;
DT 19-MAR-2014, integrated into UniProtKB/TrEMBL.
DT 19-MAR-2014, sequence version 1.
DT 24-JAN-2024, entry version 39.
DE SubName: Full=LysR family transcriptional regulator {ECO:0000313|EMBL:ETI60516.1};
GN ORFNames=C100_18825 {ECO:0000313|EMBL:ETI60516.1};
OS Sphingobium sp. C100.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Sphingobium.
OX NCBI_TaxID=1207055 {ECO:0000313|EMBL:ETI60516.1, ECO:0000313|Proteomes:UP000018867};
RN [1] {ECO:0000313|EMBL:ETI60516.1, ECO:0000313|Proteomes:UP000018867}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=C100 {ECO:0000313|EMBL:ETI60516.1,
RC ECO:0000313|Proteomes:UP000018867};
RX PubMed=24482512;
RA Dong C., Bai X., Lai Q., Xie Y., Chen X., Shao Z.;
RT "Draft Genome Sequence of Sphingobium sp. Strain C100, a Polycyclic
RT Aromatic Hydrocarbon-Degrading Bacterium from the Deep-Sea Sediment of the
RT Arctic Ocean.";
RL Genome Announc. 2:0-0(2014).
CC -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC {ECO:0000256|ARBA:ARBA00009437}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ETI60516.1}.
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DR EMBL; AYOY01000180; ETI60516.1; -; Genomic_DNA.
DR RefSeq; WP_024021288.1; NZ_AYOY01000180.1.
DR AlphaFoldDB; W1RTE1; -.
DR STRING; 1207055.C100_18825; -.
DR PATRIC; fig|1207055.3.peg.3604; -.
DR eggNOG; COG0583; Bacteria.
DR OrthoDB; 7216893at2; -.
DR Proteomes; UP000018867; Unassembled WGS sequence.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR CDD; cd08414; PBP2_LTTR_aromatics_like; 1.
DR Gene3D; 3.40.190.10; Periplasmic binding protein-like II; 2.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR005119; LysR_subst-bd.
DR InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30346:SF0; HCA OPERON TRANSCRIPTIONAL ACTIVATOR HCAR; 1.
DR PANTHER; PTHR30346; TRANSCRIPTIONAL DUAL REGULATOR HCAR-RELATED; 1.
DR Pfam; PF00126; HTH_1; 1.
DR Pfam; PF03466; LysR_substrate; 1.
DR PRINTS; PR00039; HTHLYSR.
DR SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50931; HTH_LYSR; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000018867}.
FT DOMAIN 2..59
FT /note="HTH lysR-type"
FT /evidence="ECO:0000259|PROSITE:PS50931"
SQ SEQUENCE 314 AA; 35159 MW; 92EB092EBBAFFE3D CRC64;
MIELRQLRYL IAAAHSGSFS RAARILNIKQ ATLSRHILEV ERRLGITLFD RKTRGATLTP
NGQLYLRTAR RIVNEFEELN AWVRATRNGE TGRLAVGFYT SFSAGNLRAT LSEFHDRFPA
IKVRGFERDR DMLLAGIESG LLDIAIMIGE RAYPGIMSQP LWSERHLVVM PETHPLASRE
CIHWQDLAGE RFLLTKRDPG PETRNLLLGK LGSPGHAPEI DMEDIGRDTV ISSIALGRRL
AIFAESSAGI QVPGVLFREI HDASGHSRVG YSGYWREDNE NPVLRRFLDF VATRYSLPSS
SSSHTAQPSG KEPS
//
