GenomeNet

Database: UniProt
Entry: W1RXN5_9SPHN
LinkDB: W1RXN5_9SPHN
Original site: W1RXN5_9SPHN 
ID   W1RXN5_9SPHN            Unreviewed;       106 AA.
AC   W1RXN5;
DT   19-MAR-2014, integrated into UniProtKB/TrEMBL.
DT   19-MAR-2014, sequence version 1.
DT   27-MAR-2024, entry version 28.
DE   SubName: Full=XRE family transcriptional regulator {ECO:0000313|EMBL:ETI59603.1};
GN   ORFNames=C100_20610 {ECO:0000313|EMBL:ETI59603.1};
OS   Sphingobium sp. C100.
OC   Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC   Sphingomonadaceae; Sphingobium.
OX   NCBI_TaxID=1207055 {ECO:0000313|EMBL:ETI59603.1, ECO:0000313|Proteomes:UP000018867};
RN   [1] {ECO:0000313|EMBL:ETI59603.1, ECO:0000313|Proteomes:UP000018867}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=C100 {ECO:0000313|EMBL:ETI59603.1,
RC   ECO:0000313|Proteomes:UP000018867};
RX   PubMed=24482512;
RA   Dong C., Bai X., Lai Q., Xie Y., Chen X., Shao Z.;
RT   "Draft Genome Sequence of Sphingobium sp. Strain C100, a Polycyclic
RT   Aromatic Hydrocarbon-Degrading Bacterium from the Deep-Sea Sediment of the
RT   Arctic Ocean.";
RL   Genome Announc. 2:0-0(2014).
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:ETI59603.1}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; AYOY01000192; ETI59603.1; -; Genomic_DNA.
DR   RefSeq; WP_024021625.1; NZ_AYOY01000192.1.
DR   AlphaFoldDB; W1RXN5; -.
DR   STRING; 1207055.C100_20610; -.
DR   PATRIC; fig|1207055.3.peg.3948; -.
DR   eggNOG; COG1396; Bacteria.
DR   OrthoDB; 9813152at2; -.
DR   Proteomes; UP000018867; Unassembled WGS sequence.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   CDD; cd00093; HTH_XRE; 1.
DR   Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR   InterPro; IPR001387; Cro/C1-type_HTH.
DR   InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR   PANTHER; PTHR46797:SF21; BLL1669 PROTEIN; 1.
DR   PANTHER; PTHR46797; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR   Pfam; PF13560; HTH_31; 1.
DR   SMART; SM00530; HTH_XRE; 1.
DR   SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR   PROSITE; PS50943; HTH_CROC1; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000018867}.
FT   DOMAIN          9..64
FT                   /note="HTH cro/C1-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50943"
SQ   SEQUENCE   106 AA;  12107 MW;  5F007A8A1844745E CRC64;
     MSSTLGRKVR ELRQEKKLTL DQLAQATGSS KSYMWEIENK PVARPSADKL NRIAAVLGVT
     PEYLADEERT QPTADEHDEA FYRKYQGANP DVKEKLKRIL DVLDDE
//
DBGET integrated database retrieval system