ID W1S5U6_9SPHN Unreviewed; 640 AA.
AC W1S5U6;
DT 19-MAR-2014, integrated into UniProtKB/TrEMBL.
DT 19-MAR-2014, sequence version 1.
DT 27-MAR-2024, entry version 30.
DE SubName: Full=RNA-directed DNA polymerase {ECO:0000313|EMBL:ETI64602.1};
GN ORFNames=C100_06515 {ECO:0000313|EMBL:ETI64602.1};
OS Sphingobium sp. C100.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Sphingobium.
OX NCBI_TaxID=1207055 {ECO:0000313|EMBL:ETI64602.1, ECO:0000313|Proteomes:UP000018867};
RN [1] {ECO:0000313|EMBL:ETI64602.1, ECO:0000313|Proteomes:UP000018867}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=C100 {ECO:0000313|EMBL:ETI64602.1,
RC ECO:0000313|Proteomes:UP000018867};
RX PubMed=24482512;
RA Dong C., Bai X., Lai Q., Xie Y., Chen X., Shao Z.;
RT "Draft Genome Sequence of Sphingobium sp. Strain C100, a Polycyclic
RT Aromatic Hydrocarbon-Degrading Bacterium from the Deep-Sea Sediment of the
RT Arctic Ocean.";
RL Genome Announc. 2:0-0(2014).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ETI64602.1}.
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DR EMBL; AYOY01000085; ETI64602.1; -; Genomic_DNA.
DR RefSeq; WP_024018999.1; NZ_AYOY01000085.1.
DR AlphaFoldDB; W1S5U6; -.
DR STRING; 1207055.C100_06515; -.
DR GeneID; 78525606; -.
DR PATRIC; fig|1207055.3.peg.1226; -.
DR eggNOG; COG3344; Bacteria.
DR OrthoDB; 9793236at2; -.
DR Proteomes; UP000018867; Unassembled WGS sequence.
DR GO; GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
DR GO; GO:0006397; P:mRNA processing; IEA:InterPro.
DR CDD; cd01651; RT_G2_intron; 1.
DR InterPro; IPR049030; AI2M-like_HNH.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR024937; Domain_X.
DR InterPro; IPR000477; RT_dom.
DR PANTHER; PTHR34047:SF2; NUCLEAR INTRON MATURASE 1, MITOCHONDRIAL; 1.
DR PANTHER; PTHR34047; NUCLEAR INTRON MATURASE 1, MITOCHONDRIAL-RELATED; 1.
DR Pfam; PF21368; AI2M-like_HNH; 1.
DR Pfam; PF01348; Intron_maturas2; 1.
DR Pfam; PF00078; RVT_1; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR PROSITE; PS50878; RT_POL; 1.
PE 4: Predicted;
KW Nucleotidyltransferase {ECO:0000313|EMBL:ETI64602.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000018867};
KW RNA-directed DNA polymerase {ECO:0000313|EMBL:ETI64602.1};
KW Transferase {ECO:0000313|EMBL:ETI64602.1}.
FT DOMAIN 70..369
FT /note="Reverse transcriptase"
FT /evidence="ECO:0000259|PROSITE:PS50878"
SQ SEQUENCE 640 AA; 71912 MW; 9CFBB6789787AEFD CRC64;
MLPETVKGRL EAIPALVASG KRVNGLYRLM GSRLLWEEGL QKIGSNKGAM TPGIDGETFA
DFGPEDLDPI IASVTAGTYD PKPVRRVFIP KGKGKRRPLG IPTRDDRLVQ EVARQLLERI
YEPVFSNASH GFRPGRSCHT ALEHVKAVWT GVKWLVDVDV AGFFENIDHD ILLRLLRKRI
DDEKFIGLIG SMLKAGVMED RVHTRTYSGT PQGGIVSPIL ANIYLHELDM FMAERIAAFE
RGKVRATNPE YGRLAGRIQK QRKRVTMLRA KDNVDEVKVA ASLAKIQTLL PQKRSIPSRD
AMDPGYRRLR YCRYADDFMI GVIGSKEDAR SVFAEVRAFL TEALALTVSE EKSGIRKASD
GAAFLGYEVR TYTTRQRVVR SRQGSVSFLR RPPSEVMQLH VPWEKVHAFA SAKGYGDLSV
LKPRHRSLLL SCSDVEIVLA YNAELRGFAN YYALAKDVSF KLNRLEFLQR WSLFKTLASK
HKTNVRAVVA RMRTGQEFTI GYDVDGQPRS VKVWKLAHLK RDPATSSRID IQPWTQVFTH
SRTDWVDRQN AKQCEACGRS DVPCQVHHIR GMADVSHRGF VVRMKVARAR RTVVLCEQCH
WDTHRGRLPD LRQSDGSSQW RAACGESCTC GSAGGSGLTP
//
