ID W1TPH2_9ACTO Unreviewed; 317 AA.
AC W1TPH2;
DT 19-MAR-2014, integrated into UniProtKB/TrEMBL.
DT 19-MAR-2014, sequence version 1.
DT 24-JAN-2024, entry version 28.
DE SubName: Full=DeoR family transcriptional regulator {ECO:0000313|EMBL:ETI83396.1};
GN ORFNames=Q618_VCMC00001G0977 {ECO:0000313|EMBL:ETI83396.1};
OS Varibaculum cambriense DORA_20.
OC Bacteria; Actinomycetota; Actinomycetes; Actinomycetales; Actinomycetaceae;
OC Varibaculum.
OX NCBI_TaxID=1403948 {ECO:0000313|EMBL:ETI83396.1, ECO:0000313|Proteomes:UP000018843};
RN [1] {ECO:0000313|EMBL:ETI83396.1, ECO:0000313|Proteomes:UP000018843}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DORA_20 {ECO:0000313|Proteomes:UP000018843};
RA Brown C.T., Sharon I., Thomas B.C., Castelle C.J., Morowitz M.J.,
RA Banfield J.F.;
RT "A Varibaculum cambriense genome reconstructed from a premature infant gut
RT community with otherwise low bacterial novelty that shifts toward anaerobic
RT metabolism during the third week of life.";
RL Submitted (DEC-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the SorC transcriptional regulatory family.
CC {ECO:0000256|ARBA:ARBA00010466}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ETI83396.1}.
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DR EMBL; AZMI01000001; ETI83396.1; -; Genomic_DNA.
DR AlphaFoldDB; W1TPH2; -.
DR STRING; 184870.HMPREF1862_01268; -.
DR PATRIC; fig|1403948.3.peg.1420; -.
DR eggNOG; COG2390; Bacteria.
DR Proteomes; UP000018843; Unassembled WGS sequence.
DR GO; GO:0030246; F:carbohydrate binding; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR Gene3D; 3.40.50.1360; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR000835; HTH_MarR-typ.
DR InterPro; IPR037171; NagB/RpiA_transferase-like.
DR InterPro; IPR007324; Sugar-bd_dom_put.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR PANTHER; PTHR34294:SF11; DEOXYRIBONUCLEOSIDE REGULATOR; 1.
DR PANTHER; PTHR34294; TRANSCRIPTIONAL REGULATOR-RELATED; 1.
DR Pfam; PF12802; MarR_2; 1.
DR Pfam; PF04198; Sugar-bind; 1.
DR SUPFAM; SSF109709; KorB DNA-binding domain-like; 1.
DR SUPFAM; SSF100950; NagB/RpiA/CoA transferase-like; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000018843}.
FT DOMAIN 21..55
FT /note="HTH marR-type"
FT /evidence="ECO:0000259|Pfam:PF12802"
FT DOMAIN 64..312
FT /note="Sugar-binding"
FT /evidence="ECO:0000259|Pfam:PF04198"
SQ SEQUENCE 317 AA; 34202 MW; 4DBB386729A18B6B CRC64;
MPVNLSRKDI QAIDAAKAYY GGLPQNEVAA RLGVSRPTVS KLLRYARAKG YVKITVNDPR
LADSSTAKAL MTRFGLEEAV VVYPSAPADN EVRKALGEAG ARMVEKVIKD GDTVGVSWSR
TVEEISKNLT AQPRKKVEIV QLRGGVGGFA RGQSEIEAVN RFAEAFKAKA HLLGAPTVFQ
SAEAKEAMMK EKQVAAALKR GRDSQVAVFT VGDAAKSSYL LTLPTLSRDV KLFLEQKAVG
DICSRFIDTH GRVCLPELND RTMAVTLAQL RRIPEKIMVA GGGAKVAIIR VALEHGYANR
LVIDAATAAQ VLDMRAN
//
