ID W2LVP3_PHYPR Unreviewed; 1097 AA.
AC W2LVP3;
DT 19-MAR-2014, integrated into UniProtKB/TrEMBL.
DT 19-MAR-2014, sequence version 1.
DT 27-MAR-2024, entry version 45.
DE RecName: Full=NFACT RNA-binding domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=L917_01885 {ECO:0000313|EMBL:ETM01543.1};
OS Phytophthora parasitica (Potato buckeye rot agent).
OC Eukaryota; Sar; Stramenopiles; Oomycota; Peronosporales; Peronosporaceae;
OC Phytophthora.
OX NCBI_TaxID=4792 {ECO:0000313|EMBL:ETM01543.1};
RN [1] {ECO:0000313|EMBL:ETM01543.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CHvinca01 {ECO:0000313|EMBL:ETM01543.1};
RG The Broad Institute Genomics Platform;
RA Russ C., Tyler B., Panabieres F., Shan W., Tripathy S., Grunwald N.,
RA Machado M., Johnson C.S., Arredondo F., Hong C., Coffey M., Young S.K.,
RA Zeng Q., Gargeya S., Fitzgerald M., Abouelleil A., Alvarado L.,
RA Chapman S.B., Gainer-Dewar J., Goldberg J., Griggs A., Gujja S., Hansen M.,
RA Howarth C., Imamovic A., Ireland A., Larimer J., McCowan C., Murphy C.,
RA Pearson M., Poon T.W., Priest M., Roberts A., Saif S., Shea T., Sykes S.,
RA Wortman J., Nusbaum C., Birren B.;
RT "The Genome Sequence of Phytophthora parasitica CHvinca01.";
RL Submitted (NOV-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the NEMF family.
CC {ECO:0000256|ARBA:ARBA00008318}.
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DR EMBL; KI677687; ETM01543.1; -; Genomic_DNA.
DR AlphaFoldDB; W2LVP3; -.
DR EnsemblProtists; ETM01543; ETM01543; L917_01885.
DR VEuPathDB; FungiDB:PPTG_19141; -.
DR Proteomes; UP000054423; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR GO; GO:0072344; P:rescue of stalled ribosome; IEA:UniProt.
DR Gene3D; 2.30.310.10; ibrinogen binding protein from staphylococcus aureus domain; 1.
DR InterPro; IPR021846; NFACT-C.
DR InterPro; IPR008532; NFACT_RNA-bd.
DR PANTHER; PTHR15239; NUCLEAR EXPORT MEDIATOR FACTOR NEMF; 1.
DR PANTHER; PTHR15239:SF6; RIBOSOME QUALITY CONTROL COMPLEX SUBUNIT NEMF; 1.
DR Pfam; PF11923; NFACT-C; 1.
DR Pfam; PF05670; NFACT-R_1; 1.
DR Pfam; PF05833; NFACT_N; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054};
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490}.
FT DOMAIN 579..698
FT /note="NFACT RNA-binding"
FT /evidence="ECO:0000259|Pfam:PF05670"
FT DOMAIN 949..1068
FT /note="NFACT protein C-terminal"
FT /evidence="ECO:0000259|Pfam:PF11923"
FT REGION 286..320
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 728..957
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1008..1040
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1068..1097
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 759..773
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 795..851
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 868..889
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 901..915
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 929..945
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1009..1034
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1097 AA; 122731 MW; 6B175D644C4E5CDC CRC64;
MKKTRMSIDD IHAMVGSIRA NVVNMRVTNI YDVQGQGDGG AAKTYILKLH QPPFPKVFLL
LESGVRFHTS KYARDAKAGN ALPSQFTMKL RKHLRGKRLS ALTQLEGDRV VDFTFGQGAL
KCHLILELYA SGNIILTDGD YRILSLLRTH RFDENVKMAV KQEYPVQLLG DQEKQRGIQT
TEQLTEFVNR WFEEQEAKAA IAVPGKTQKK KKAQTIKQLL LVKESTFGGL GPVIIEHCLV
RADISPTLKI KNAAEFTALG EDKLAALLAA IQEGWKLLER LRDEQTSVNG PVPVQNDDTA
EAGDSDEEDA APTTTKTSST TSQKCGFIIL KDSADENAPE QFEEFTPFLY AQHLQAHKKV
KSFDTFDEAV DEYFSRFEAE TAEVAKQSAQ IAAENKLAKL KKNQQQQLAQ LREVQEQSFQ
HAQLIEANQQ DVENVLLVIR SALASGMDWR GLEELVRYEQ KNGNPVASLI HQLDLEHNRV
AILLCDDDDD DEDGDGGDGT GEEDKKAHVI WIDLSLSALA NAREIYTKKK KAGEKVKKAT
EATDKAIALA EKNTKKTLEK QQTKRNVIYQ RRKTHWFEKF HWFLSNEKYL VVAGKDAHQN
ELLVKRYLRK GDVYVHADLH GAATCIVRNH ATVKDKKTQE LPPIPVATLE QAGCMSVCRS
NAWTSQVIAG AYWVHADQVS KTAPAGEYLT TGSFMIRGKK NYIQPSRLEM GLAILFRIDE
SCISNHARQG EGRVSRIDEG PEDDEGEESA SPVAEVQPEK QTTEEESVPD ESMSKPSKEV
TVVQENESDA HEEEDEVSAQ QTQREGRKRL SAKERRDMKK GKAPAREESI DEQPPVQQKR
GKGKDKTPTQ APQKKSVRGK KGKMKKMKKK YADQDEEDRR LRMEALGHVV EDEQEDDEPT
KENDSTEHSG DEDGDNTTDG NTTTEVSEEY IRQQREKKEK YLDEQEDEAE GADFFDAFTG
EPLPNDIVLF AMPMCAPYAS LTKFKYKVKL TPGSQKKGKA TKQAMEHFFA SNLKDEKDAS
KTSGPHRNGE ADDEVQPDVN PIVVQRELMR CIPDNELVNC MVGPVKISAP GLHGPNAGGK
KGGGKRPSGK PKKKGKK
//