ID W2PWN4_PHYPN Unreviewed; 1851 AA.
AC W2PWN4;
DT 19-MAR-2014, integrated into UniProtKB/TrEMBL.
DT 19-MAR-2014, sequence version 1.
DT 27-MAR-2024, entry version 59.
DE RecName: Full=Chromodomain-helicase-DNA-binding protein 6 {ECO:0008006|Google:ProtNLM};
GN ORFNames=PPTG_15094 {ECO:0000313|EMBL:ETN04430.1};
OS Phytophthora parasitica (strain INRA-310).
OC Eukaryota; Sar; Stramenopiles; Oomycota; Peronosporales; Peronosporaceae;
OC Phytophthora.
OX NCBI_TaxID=761204 {ECO:0000313|EMBL:ETN04430.1, ECO:0000313|Proteomes:UP000018817};
RN [1] {ECO:0000313|Proteomes:UP000018817}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=INRA-310 {ECO:0000313|Proteomes:UP000018817};
RG The Broad Institute Genome Sequencing Platform;
RA Russ C., Tyler B., Panabieres F., Shan W., Tripathy S., Grunwald N.,
RA Machado M., Young S.K., Zeng Q., Gargeya S., Fitzgerald M., Haas B.,
RA Abouelleil A., Alvarado L., Arachchi H.M., Berlin A., Chapman S.B.,
RA Gearin G., Goldberg J., Griggs A., Gujja S., Hansen M., Heiman D.,
RA Howarth C., Larimer J., Lui A., MacDonald P.J.P., McCowen C.,
RA Montmayeur A., Murphy C., Neiman D., Pearson M., Priest M., Roberts A.,
RA Saif S., Shea T., Sisk P., Stolte C., Sykes S., Wortman J., Nusbaum C.,
RA Birren B.;
RL Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ETN04430.1, ECO:0000313|Proteomes:UP000018817}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=INRA-310 {ECO:0000313|EMBL:ETN04430.1,
RC ECO:0000313|Proteomes:UP000018817};
RG The Broad Institute Genomics Platform;
RA Russ C., Tyler B., Panabieres F., Shan W., Tripathy S., Grunwald N.,
RA Machado M., Johnson C.S., Arredondo F., Hong C., Coffey M., Young S.K.,
RA Zeng Q., Gargeya S., Fitzgerald M., Abouelleil A., Alvarado L.,
RA Chapman S.B., Gainer-Dewar J., Goldberg J., Griggs A., Gujja S., Hansen M.,
RA Howarth C., Imamovic A., Ireland A., Larimer J., McCowan C., Murphy C.,
RA Pearson M., Poon T.W., Priest M., Roberts A., Saif S., Shea T., Sykes S.,
RA Wortman J., Nusbaum C., Birren B.;
RT "The Genome Sequence of Phytophthora parasitica INRA-310.";
RL Submitted (NOV-2013) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; KI669604; ETN04430.1; -; Genomic_DNA.
DR RefSeq; XP_008910357.1; XM_008912109.1.
DR STRING; 761204.W2PWN4; -.
DR EnsemblProtists; ETN04430; ETN04430; PPTG_15094.
DR GeneID; 20184313; -.
DR VEuPathDB; FungiDB:PPTG_15094; -.
DR OMA; YLEIHRI; -.
DR OrthoDB; 33987at2759; -.
DR Proteomes; UP000018817; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0140658; F:ATP-dependent chromatin remodeler activity; IEA:InterPro.
DR GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd17995; DEXHc_CHD6_7_8_9; 1.
DR CDD; cd18793; SF2_C_SNF; 1.
DR Gene3D; 2.40.50.40; -; 2.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.40.50.10810; Tandem AAA-ATPase domain; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR016197; Chromo-like_dom_sf.
DR InterPro; IPR000953; Chromo/chromo_shadow_dom.
DR InterPro; IPR023780; Chromo_domain.
DR InterPro; IPR023779; Chromodomain_CS.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR038718; SNF2-like_sf.
DR InterPro; IPR049730; SNF2/RAD54-like_C.
DR InterPro; IPR000330; SNF2_N.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR45623; CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED; 1.
DR PANTHER; PTHR45623:SF11; KISMET, ISOFORM C; 1.
DR Pfam; PF00385; Chromo; 2.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF00176; SNF2-rel_dom; 1.
DR SMART; SM00298; CHROMO; 2.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SMART; SM00249; PHD; 1.
DR SUPFAM; SSF54160; Chromo domain-like; 2.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS00598; CHROMO_1; 1.
DR PROSITE; PS50013; CHROMO_2; 2.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Helicase {ECO:0000256|ARBA:ARBA00022806};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000018817};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771}.
FT DOMAIN 229..318
FT /note="Chromo"
FT /evidence="ECO:0000259|PROSITE:PS50013"
FT DOMAIN 342..402
FT /note="Chromo"
FT /evidence="ECO:0000259|PROSITE:PS50013"
FT DOMAIN 454..632
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 766..918
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 147..222
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 915..937
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1026..1078
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1296..1351
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1775..1795
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1818..1851
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 193..219
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1051..1078
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1298..1314
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1328..1349
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1820..1851
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1851 AA; 212283 MW; B496EAA85937295D CRC64;
MATPDPTPYC VCQQTDGAGI MIECIRGSGG CNGWVHPSCC GLILTQEELE ALDAYVCPLC
EKPDDDFTKL TAFNTSLANR QAKRERKRKL QPAKPVKKPW ICAACQHPNR DRRTRECEAC
HTRRVMTKKP RDKDLNDDEK SRLLAEQLQD DRRHSKRSAN RKRKSYHVPN SDEDIASSDS
DNYKKKHKKH KKRPRDDDSE SDEAEFQLDT SKLKQEAKPA EDQAAVATMV IDKIMGVRQR
EVVEPAPVPP ADSVSANLFA NRPAKTSITE YLIKWKGFAY MHASWETKQV LLDLDPLTNK
QKIKRFHEKE QHRLQYPHRQ TGNLDEDSLA VDELEYFNPE YLEIHRIIAH RQDAPMPPDP
NFPDAPVDDG MRYYIKWRIL PYTEATWERA CDIKDDAALA KYKASIVVPD EEVWKPRPRP
SIREYRKLEE SPKFGEDQSL SLRAYQLEGL NWLLWNWYNE RPSILADEMG LGKTIQTLSF
LNLLRDDPKI KIRGPFLIVA PLSLIVQWQN ECEMWTTMNC VVYHGNSASR EIIRDYEFNY
LDDKLRPDKK KAYRFNILVT TYEVAIKDIA VLSKIHWRCL VVDEAHRLKN QSSRLVEQMR
SLRRDHCVLL TGTPLQNKTE ELWALLNFLD SRSFPSVSDF LEKFGDLHEA QQVADLHKML
KPYLLRRVKE DVEKSLPPKE ETIVEVELTP VQKQWYRAIY ERNTAFLNRG GNPRNVPNLM
NVMMELRKCC NHPYLNNGVE EILNEGLTTD TQRHEMMVKC CGKMVLIDKL LPRLNDGGHK
VLIFSQMVRV LDIIEDYLRY CGYLYERLDG NIRGNDRQAA VDRFVKPEYK RFVMLLSTKA
GGLGLNLTAA DTVIIFDSDW NPQNDLQAQA RAHRIGQTHS VKIYRLITRK TYEMHMFHKA
SLKLGLDKAV LTHMRRENEE EGGKKRNKSS KAQESKEIDE LLKRGAYDVF RDDDNAGEQF
CALDIDQILQ RSSQIVQYTE QAQSSFSKAS FVSATTSDDV DLDDPDFWKK AVGLSEPDPV
EAEDLLPQQR KRTRVARFGD GGSFSDGSIS DDEFEQEKRD KEERERLEEK SAPREWTQNG
RDRLQRALMH YGFGRWEIIR SQSGGSRSVK EVERFARGFI YVSALACDQR KDDSTFVKAS
IHAAMFAQKE NLIDEEELSP VLKEEDFVLK SKQGGGRRVV VRLDMLQRLQ QLVTTACNVC
DELYKEDEDS SKPRPNPTAS IDERARYYGV DKLVPHIELV DVGERPAWTQ ITPWWNEDAD
RNLLMGVFLH GYGRCAQILA DPRLYFARLE KAARDQVEAS NGGSSNQTTS AALPAREGAV
SAEDDVGMSD SESASSSAND DSSAKSNGKA EADVTAAANS FKQPEVQHMN RLLGWLLSAE
EIKRRHEKEK FKKERVAMEQ RRQIAQEMRA RTMTLRRLEL KAMQLAQVDI LRHMAVLHNA
RQLPEATVAP ASHHRMKNTD WTKEERRSFA YMMAIHGAPR ILAKRAVVAP DGRATPSMLP
FVTEQAREFA WETDSVSWRN IVEWGNLNKT AMMARTFYET KFAPKCREVA RMRADPLGSD
QRAVALGDLI GIEFVDAYEG VLAHGLKARN TAWVTMRRTQ LLEDVLEILS TKRVALEAYL
KSGQESLVAD MPVWWCPWIH DLGVFYGMAR HGVCGWERIM LDRQLPFHRQ AREHHIRTVF
LEGTPTFRPL YRHHFESTTE MNDWFMRVMN EFPSLSILER KVETICAAVL EEFGTSAERY
VEPEERREFS LSPPGNCFEE LVLSRVKQEE ELLPSIEPLP AGTATDEGNA GPPEALTAFL
NESQGRRDEY LRAAEASNAI GSSAKANEAS VVANGQEEQK SSQIPIEMLV S
//