ID W2PXM5_PHYPN Unreviewed; 1405 AA.
AC W2PXM5;
DT 19-MAR-2014, integrated into UniProtKB/TrEMBL.
DT 19-MAR-2014, sequence version 1.
DT 27-MAR-2024, entry version 30.
DE RecName: Full=SCD domain-containing protein {ECO:0000259|PROSITE:PS51425};
GN ORFNames=PPTG_14385 {ECO:0000313|EMBL:ETN05708.1};
OS Phytophthora parasitica (strain INRA-310).
OC Eukaryota; Sar; Stramenopiles; Oomycota; Peronosporales; Peronosporaceae;
OC Phytophthora.
OX NCBI_TaxID=761204 {ECO:0000313|EMBL:ETN05708.1, ECO:0000313|Proteomes:UP000018817};
RN [1] {ECO:0000313|Proteomes:UP000018817}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=INRA-310 {ECO:0000313|Proteomes:UP000018817};
RG The Broad Institute Genome Sequencing Platform;
RA Russ C., Tyler B., Panabieres F., Shan W., Tripathy S., Grunwald N.,
RA Machado M., Young S.K., Zeng Q., Gargeya S., Fitzgerald M., Haas B.,
RA Abouelleil A., Alvarado L., Arachchi H.M., Berlin A., Chapman S.B.,
RA Gearin G., Goldberg J., Griggs A., Gujja S., Hansen M., Heiman D.,
RA Howarth C., Larimer J., Lui A., MacDonald P.J.P., McCowen C.,
RA Montmayeur A., Murphy C., Neiman D., Pearson M., Priest M., Roberts A.,
RA Saif S., Shea T., Sisk P., Stolte C., Sykes S., Wortman J., Nusbaum C.,
RA Birren B.;
RL Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ETN05708.1, ECO:0000313|Proteomes:UP000018817}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=INRA-310 {ECO:0000313|EMBL:ETN05708.1,
RC ECO:0000313|Proteomes:UP000018817};
RG The Broad Institute Genomics Platform;
RA Russ C., Tyler B., Panabieres F., Shan W., Tripathy S., Grunwald N.,
RA Machado M., Johnson C.S., Arredondo F., Hong C., Coffey M., Young S.K.,
RA Zeng Q., Gargeya S., Fitzgerald M., Abouelleil A., Alvarado L.,
RA Chapman S.B., Gainer-Dewar J., Goldberg J., Griggs A., Gujja S., Hansen M.,
RA Howarth C., Imamovic A., Ireland A., Larimer J., McCowan C., Murphy C.,
RA Pearson M., Poon T.W., Priest M., Roberts A., Saif S., Shea T., Sykes S.,
RA Wortman J., Nusbaum C., Birren B.;
RT "The Genome Sequence of Phytophthora parasitica INRA-310.";
RL Submitted (NOV-2013) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; KI669599; ETN05708.1; -; Genomic_DNA.
DR RefSeq; XP_008909230.1; XM_008910982.1.
DR EnsemblProtists; ETN05708; ETN05708; PPTG_14385.
DR GeneID; 20183679; -.
DR VEuPathDB; FungiDB:PPTG_14385; -.
DR OMA; YLEIQMT; -.
DR OrthoDB; 5354237at2759; -.
DR Proteomes; UP000018817; Unassembled WGS sequence.
DR GO; GO:0005694; C:chromosome; IEA:UniProt.
DR GO; GO:0005634; C:nucleus; IEA:UniProt.
DR GO; GO:0007062; P:sister chromatid cohesion; IEA:UniProt.
DR Gene3D; 1.25.10.10; Leucine-rich Repeat Variant; 1.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR039662; Cohesin_Scc3/SA.
DR InterPro; IPR020839; SCD.
DR InterPro; IPR013721; STAG.
DR PANTHER; PTHR11199:SF0; LD34181P-RELATED; 1.
DR PANTHER; PTHR11199; STROMAL ANTIGEN; 1.
DR Pfam; PF21581; SCD; 1.
DR Pfam; PF08514; STAG; 1.
DR SUPFAM; SSF48371; ARM repeat; 1.
DR PROSITE; PS51425; SCD; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000018817};
KW Signal {ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..28
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 29..1405
FT /note="SCD domain-containing protein"
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5004822543"
FT DOMAIN 334..419
FT /note="SCD"
FT /evidence="ECO:0000259|PROSITE:PS51425"
FT REGION 29..100
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1231..1405
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 81..96
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1231..1265
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1271..1290
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1318..1346
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1363..1378
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1405 AA; 159215 MW; DA15B4738B9A59E5 CRC64;
MVVGALNVHS SWILYVQLLT PWRGLCSSED GREGEDEEFT PAGTKVKKST RASKAARTPT
TRARPSRRKR SPWSQTRSLR STGEESKRKR NGVTAETDEA AETAYAVDQG DDVTSLFEAI
KGGKASLENL MSEWRDRFED DDEKATREVL NLVLQACGGT GKCVPESEPL AQLDMGDMVD
HVVEDLEKAN GEYPLMSRGR GMRKFQRKFE EFWEVFVKEC YESEILFTSE IANNFIDWLT
TLSSSELRPI RHTATVAVLA FSNSLVRTAA NISKQLAIAM RQLNAEMNSP GSTPGAVKSP
NARKVALLKD NRALYENRLQ QVLKLVNLVF TGVVVHRYRD VMPEIRVVAI QCLGHWITTL
PDQFLKDSFL KYLGWLLSDK SASVRLEVVE ILCELYENDS FTEKLELFTA RFLPRYLELC
NDVDESVVEV CIHLLIAVDK HNLISSDVEL QPVERLVFDA EHEDIRKAAA EFVCIQYDAF
GVAVSKTKNA TLKKEQLNTQ AIALVEFAEE YIQNYGVPED AVETLVDAFW GLEDCLVLQS
WRVMTDLLLV DKTAPDLSSE QQTILLRLLV ASIRKLVGDG VNRSARAAAK RESEQLQEEI
TVAYCKDIPS LFLLYQADSD KLALLLELIP TLTLKSEVIG HHSGQVKDLL EKLKHAYLLH
SDEELLTSLS LSITHLLQTE HASLKREAEV IMHELIQVIM DKTDRLLEAD RKLFGEFAIA
ADDTPKTRSS KTKGRNKKSA KTKEISDVEY GLRVSLCRIK CLAKYLNIRE YLPSDLSLSK
VDGDGHTTAT DLQQGRMDIL VAAVGDLLHR RTLLASELHE VFRHVDAIKH GMTIIYFDLL
WNTAPIFKNV EEHKKQNTTS ENTEAEVDPS IQNQIQKVCQ ARSTLEGALI SVLEMHLSRT
NETADEEHKE SEETRDEEYI MEEIEFEDED VISYVKDAQR FAFLTFCDLR CLFVEKFQDA
PAPYDALQWT LPNVLVLLTQ MHFEREMDDA EEEEPEFEDD MVENDLDVAK DKAQALREWQ
EKQQRKAELL LALGRVALCN PSKKYQAAAV LQCFTSSDKP SVEVVKAFGK QVKTDAPVRY
LEIQMAALRQ LFNPILAWKQ DIEAAQGSED INDDDVTELK EKVESSEHEL KELAKRFSQS
LGVGKVPSSL RAPFFRFLRE GVRYALEQPT QFEFLEIMRV YLSRLDNASM AQLREYFLER
LKSLHDVPDN EDLDSRWRAL FDFQASITSS GTANGMNKNL TRTMLSPPLK SKRRSASSEP
TPMQGTSIAE EGEEDNAERE GGEGEETESG AGDQGEMNKT GHGEQVDHNN RHRSSVHKRT
AKADEDSDSM PSRKRARRAR NADEAESSDD ELSEANNLDH QLQNESKSEE DEPNNEVQTH
GHTQDAAGNE EEEENRRTRR KRRRA
//
