ID W2YGC7_PHYPR Unreviewed; 841 AA.
AC W2YGC7;
DT 19-MAR-2014, integrated into UniProtKB/TrEMBL.
DT 19-MAR-2014, sequence version 1.
DT 27-MAR-2024, entry version 25.
DE SubName: Full=Oxoglutarate dehydrogenase (Succinyl-transferring), E1 component, variant 4 {ECO:0000313|EMBL:ETP33209.1};
GN ORFNames=F442_18194 {ECO:0000313|EMBL:ETP33209.1};
OS Phytophthora parasitica P10297.
OC Eukaryota; Sar; Stramenopiles; Oomycota; Peronosporales; Peronosporaceae;
OC Phytophthora.
OX NCBI_TaxID=1317064 {ECO:0000313|EMBL:ETP33209.1, ECO:0000313|Proteomes:UP000018948};
RN [1] {ECO:0000313|EMBL:ETP33209.1, ECO:0000313|Proteomes:UP000018948}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=P10297 {ECO:0000313|EMBL:ETP33209.1,
RC ECO:0000313|Proteomes:UP000018948};
RG The Broad Institute Genomics Platform;
RA Russ C., Tyler B., Panabieres F., Shan W., Tripathy S., Grunwald N.,
RA Machado M., Johnson C.S., Walker B., Young S.K., Zeng Q., Gargeya S.,
RA Fitzgerald M., Haas B., Abouelleil A., Allen A.W., Alvarado L.,
RA Arachchi H.M., Berlin A.M., Chapman S.B., Gainer-Dewar J., Goldberg J.,
RA Griggs A., Gujja S., Hansen M., Howarth C., Imamovic A., Ireland A.,
RA Larimer J., McCowan C., Murphy C., Pearson M., Poon T.W., Priest M.,
RA Roberts A., Saif S., Shea T., Sisk P., Sykes S., Wortman J., Nusbaum C.,
RA Birren B.;
RT "The Genome Sequence of Phytophthora parasitica P10297.";
RL Submitted (NOV-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- COFACTOR:
CC Name=thiamine diphosphate; Xref=ChEBI:CHEBI:58937;
CC Evidence={ECO:0000256|ARBA:ARBA00001964};
CC -!- SIMILARITY: Belongs to the alpha-ketoglutarate dehydrogenase family.
CC {ECO:0000256|ARBA:ARBA00006936}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ETP33209.1}.
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DR EMBL; ANIY01003793; ETP33209.1; -; Genomic_DNA.
DR AlphaFoldDB; W2YGC7; -.
DR EnsemblProtists; ETP33209; ETP33209; F442_18194.
DR Proteomes; UP000018948; Unassembled WGS sequence.
DR GO; GO:0004591; F:oxoglutarate dehydrogenase (succinyl-transferring) activity; IEA:UniProtKB-EC.
DR GO; GO:0030976; F:thiamine pyrophosphate binding; IEA:InterPro.
DR GO; GO:0006099; P:tricarboxylic acid cycle; IEA:InterPro.
DR CDD; cd02016; TPP_E1_OGDC_like; 1.
DR Gene3D; 3.40.50.12470; -; 1.
DR Gene3D; 3.40.50.970; -; 1.
DR Gene3D; 1.10.287.1150; TPP helical domain; 1.
DR InterPro; IPR011603; 2oxoglutarate_DH_E1.
DR InterPro; IPR001017; DH_E1.
DR InterPro; IPR029061; THDP-binding.
DR InterPro; IPR005475; Transketolase-like_Pyr-bd.
DR NCBIfam; TIGR00239; 2oxo_dh_E1; 1.
DR PANTHER; PTHR23152:SF4; 2-OXOADIPATE DEHYDROGENASE COMPLEX COMPONENT E1; 1.
DR PANTHER; PTHR23152; 2-OXOGLUTARATE DEHYDROGENASE; 1.
DR Pfam; PF00676; E1_dh; 1.
DR Pfam; PF02779; Transket_pyr; 1.
DR PIRSF; PIRSF000157; Oxoglu_dh_E1; 1.
DR SMART; SM00861; Transket_pyr; 1.
DR SUPFAM; SSF52518; Thiamin diphosphate-binding fold (THDP-binding); 2.
PE 3: Inferred from homology;
KW Oxidoreductase {ECO:0000256|ARBA:ARBA00023002};
KW Reference proteome {ECO:0000313|Proteomes:UP000018948};
KW Thiamine pyrophosphate {ECO:0000256|ARBA:ARBA00023052}.
FT DOMAIN 570..800
FT /note="Transketolase-like pyrimidine-binding"
FT /evidence="ECO:0000259|SMART:SM00861"
SQ SEQUENCE 841 AA; 95308 MW; E1D2C9C1AA928FC4 CRC64;
MLRVLRKGGA VRARPVAVVL RRWKSEKLTP PVQKLSDDIR RSQEETRRVL LLIRTFKQYG
HYVAQIDPLQ KREKLPELER WINGDRDLDR EFFIGQDLSI GPVATLREIV TELRELFCGH
IGLEYQHLRN RDAALWIRER LEKYKENQFS NEEKVDMLRQ MVQAELFERF LGRRFSGAKR
FSIEGCESLI PGLCELLESA SEHGVEVVQM GMAHRGRLNV LANVLQRPLR SIISQFQPYL
PDEPDYPNNS DDVRYHLGTS SVIEMRNGKN LEVTLAANPS HLEAVNPVVL GQARACQTQL
GDDGSRVMPI LIHGDASMFQ GSVREALGFS SLEDFRTGGT IHVIINNQIG FTTLPKNADS
AVYCTDVAKV SRSPIFHVNA DDPEAVAKVM RIAVEFRQKF QCDVTIDLVC YRRHGHNEQD
SPEITAPIMY HFINKHPTVI KLYSQKLTSE GALSPKEYVK MCSTFEDHLV SEYHHSREIH
SGWDDPGDTS WKTEWYADSK IPNSETPANT SNVCDNNDKQ IYDRSTGVDQ NFLEKVGSQL
FRIPQGFSAH RKVEAIMNNR LRAVETGARV DWATAEMLAF GSLLVEGVDV RLSGQDCERG
TFNQRHAVLY DQFEALSGRN SSYTPLNNLD VEGIRSTLQM TGLESARRGR FDVVNSPLSE
EGVLGFEYGY SLQTPMGLTI WEAQFGDFAN GAQTMIDTFI TTGEQKWQRQ SGIVLNLPHG
FEGQGPEHSS ARLERFLQLV NEDSDEFTGE QDVNAAITRT NIQVVIPSTP AQYFHALRRQ
VSSSYRKPLI MFTPKSLLHH RPCNSDLADL VVGTSFQRVL PPHPDDQVTM VNDDEVRLIY
S
//